LOC111195867


Basic Information

Item Value
gene id LOC111195867
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 26092170 ~ 26095191 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022684393.1
TTAAAGAGCGACAGCCAGAGCTTCATAATGTCTGCGGAGAAGATGCGCTGGATGGGTTTGACCCTGGGGCTGGTCCTGCTGATTGCAGTCTCCTCAGATGCAGCACctttagctataCAACAGCCTGAGGAGTGCTGCTTCACCTTTGTCAGTTTTACAATCCCCAAACATGCCGTCGAAGAAATAAAAAGACTTTCGGTCCACTGCCCCAAACCAGGCTACATAGTTACAACTCCTAAAGGAAGGATGCGTCAGAAGACTCTCGACATCTCTACAGAGTAA

Function

GO:

id name namespace
GO:0008519 ammonium transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022684393.1 True 282 mRNA 0.49 3 26092170 26095191

Neighbor

gene id symbol gene type direction distance location
LOC103040521 NA coding downstream 406559 25681230 ~ 25685611 (-)
znrf1 znrf1,LOC107589180,LOC107714072 coding downstream 519899 25496301 ~ 25572271 (-)
LOC103040081 snrkb,LOC108413384,LOC108268812,LOC107674965,LOC107589179,LOC107571964,LOC107714071 coding downstream 640079 25412186 ~ 25452091 (-)
ccdc113 NA coding downstream 814410 25270141 ~ 25277760 (-)
drc7 NA coding downstream 861159 25212565 ~ 25231011 (-)
LOC111195834 NA coding upstream 1614 26096805 ~ 26099827 (-)
LOC111195836 NA coding upstream 149057 26244248 ~ 26246421 (-)
LOC103031232 arntl1a,LOC108439331,LOC107707455,LOC107753525,LOC107665721,LOC108269000 coding upstream 518671 26613862 ~ 26640223 (-)
cep290 cep290 coding upstream 578415 26673606 ~ 26715253 (-)
kitlg NA coding upstream 697571 26792762 ~ 26815459 (-)
G208015 sept15,LOC108428130,LOC107707522,LOC107701486,LOC107654154 non-coding downstream 15524 26061311 ~ 26076646 (-)
G208011 NA non-coding downstream 77167 26014747 ~ 26015003 (-)
G208008 NA non-coding downstream 78554 26007220 ~ 26013616 (-)
G207965 NA non-coding downstream 174610 25903907 ~ 25917560 (-)
G207964 NA non-coding downstream 197693 25893140 ~ 25894477 (-)
G208026 uba2,LOC107701803 non-coding upstream 26286 26121477 ~ 26122367 (-)
G208027 uba2 non-coding upstream 28156 26123347 ~ 26124768 (-)
G208030 NA non-coding upstream 31916 26127107 ~ 26157046 (-)
G208029 ca5a,LOC107583128,LOC108268921,LOC107701525,LOC107654151,LOC107581837 non-coding upstream 39395 26134586 ~ 26155268 (-)
G208042 NA non-coding upstream 68724 26163915 ~ 26169806 (-)
LOC111195761 NA other downstream 3755 26086651 ~ 26088415 (-)
LOC111195762 NA other downstream 5666 26079764 ~ 26086504 (-)
LOC111195825 NA other downstream 99676 25989438 ~ 25992494 (-)
LOC111195756 NA other downstream 154138 25919220 ~ 25938032 (-)
G207940 NA other downstream 358866 25592631 ~ 25733304 (-)
LOC111195835 NA other upstream 8296 26103487 ~ 26117632 (-)
G208046 NA other upstream 116867 26212058 ~ 26212841 (-)
G208394 borcs5,LOC107753635 other upstream 560252 26655443 ~ 26656184 (-)
wwp2 wwp2,LOC108439047,LOC107740243,LOC107560080 other upstream 2121204 28216395 ~ 28268369 (-)
LOC107197304 NA other upstream 2566992 28662183 ~ 28695700 (-)

Expression


Co-expression Network