LOC111195771


Basic Information

Item Value
gene id LOC111195771
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 27146036 ~ 27152300 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XR_002651797.1
TTACATCACAACTTCAGCTTGTGAGCAGCCACATTGtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002651797.1 True 50 ncRNA 0.46 3 27146036 27152300

Neighbor

gene id symbol gene type direction distance location
LOC111195765 NA coding downstream 34998 27108299 ~ 27111038 (-)
LOC111195857 NA coding downstream 192563 26951689 ~ 26953473 (-)
LOC111195856 NA coding downstream 196666 26946294 ~ 26949370 (-)
kitlg NA coding downstream 330577 26792762 ~ 26815459 (-)
cep290 cep290 coding downstream 430783 26673606 ~ 26715253 (-)
tmem231 tmem231 coding upstream 1004467 28156767 ~ 28163353 (-)
adat1 NA coding upstream 1024840 28177140 ~ 28193065 (-)
nup160 nup160,LOC107555692,LOC107756876 coding upstream 1158566 28310866 ~ 28367957 (-)
rpl27a rpl27a,LOC107687759,LOC108439055 coding upstream 1320221 28472521 ~ 28476854 (-)
psma1 psma1,LOC108439057,LOC107748950 coding upstream 1331191 28483491 ~ 28489434 (-)
G208487 NA non-coding downstream 134924 27008167 ~ 27011112 (-)
G208481 NA non-coding downstream 154108 26991493 ~ 26991928 (-)
LOC111195768 NA non-coding downstream 189586 26954767 ~ 26956450 (-)
LOC111195769 NA non-coding downstream 194712 26950914 ~ 26951324 (-)
G208455 NA non-coding downstream 251986 26885476 ~ 26894050 (-)
G208518 NA non-coding upstream 12876 27165176 ~ 27181579 (-)
G208519 NA non-coding upstream 16478 27168778 ~ 27170164 (-)
G208520 NA non-coding upstream 18453 27170753 ~ 27174391 (-)
G208521 NA non-coding upstream 18863 27171163 ~ 27173252 (-)
G208527 NA non-coding upstream 54510 27206810 ~ 27207649 (-)
G208394 borcs5,LOC107753635 other downstream 489852 26655443 ~ 26656184 (-)
G208046 NA other downstream 933195 26212058 ~ 26212841 (-)
LOC111195835 NA other downstream 1028404 26103487 ~ 26117632 (-)
LOC111195761 NA other downstream 1057621 26086651 ~ 26088415 (-)
LOC111195762 NA other downstream 1059532 26079764 ~ 26086504 (-)
wwp2 wwp2,LOC108439047,LOC107740243,LOC107560080 other upstream 1064095 28216395 ~ 28268369 (-)
LOC107197304 NA other upstream 1509883 28662183 ~ 28695700 (-)
lrp5 lrp5,LOC107654131,LOC107714037,LOC107581849,LOC107701817,LOC106573620 other upstream 1630783 28783083 ~ 28860774 (-)
G209090 NA other upstream 2871661 30023961 ~ 30024550 (-)
G209127 NA other upstream 3010157 30162457 ~ 30162973 (-)

Expression


Co-expression Network