trnae-uuc_23


Basic Information

Item Value
gene id trnae-uuc_23
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 16143288 ~ 16143359 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnae-uuc_23
TCCCATATGGTCTAGCGGTTAGGATTCCTGGTTTTCACCCAGGCGGCCCGGGTTCGACTCCCGGTATGGGAa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnae-uuc_23 True 72 tRNA 0.58 1 16143288 16143359

Neighbor

gene id symbol gene type direction distance location
LOC103026525 LOC108427881 coding downstream 709 16044178 ~ 16142579 (-)
LOC111195849 NA coding downstream 116125 16026717 ~ 16027163 (-)
btk btk coding downstream 2170259 13941252 ~ 13973029 (-)
timm8a timm8a,LOC107593201,LOC107680336,LOC107742474 coding downstream 2212376 13928962 ~ 13930912 (-)
sil1 NA coding downstream 2244575 13889589 ~ 13898713 (-)
cenpi cenpi coding upstream 351997 16495356 ~ 16521829 (-)
tmem35a tmem35a,tmem35,LOC107724834,LOC107688707 coding upstream 379727 16523086 ~ 16527085 (-)
arl13a arl13a coding upstream 392406 16535765 ~ 16545692 (-)
cstf2 cstf2,LOC107688691 coding upstream 461058 16604417 ~ 16627114 (-)
trnav-uac_1 NA coding upstream 482884 16626243 ~ 16626315 (-)
G205799 NA non-coding downstream 51617 16054036 ~ 16091671 (-)
G205800 NA non-coding downstream 76572 16065584 ~ 16066716 (-)
G205795 NA non-coding downstream 128605 16014229 ~ 16014683 (-)
G205778 NA non-coding downstream 204993 15832297 ~ 15938295 (-)
G205782 NA non-coding downstream 261232 15881671 ~ 15882056 (-)
G205812 NA non-coding upstream 52747 16196106 ~ 16200003 (-)
G205814 NA non-coding upstream 199882 16343241 ~ 16347559 (-)
G205859 NA non-coding upstream 257719 16401078 ~ 16403080 (-)
G205883 NA non-coding upstream 388152 16531511 ~ 16531867 (-)
G205916 NA non-coding upstream 459041 16602400 ~ 16653278 (-)
G205670 NA other downstream 311194 15831650 ~ 15832094 (-)
pcdh19 pcdh19,LOC107680972,LOC107740148,LOC107688683 other downstream 575653 15407944 ~ 15567635 (-)
G205640 NA other downstream 597666 15543917 ~ 15545622 (-)
LOC103033354 hnrnpa0b,LOC108269291,LOC107742478,LOC107680980,LOC107740136,LOC108427887,LOC107593198,LOC107554842,LOC107680347 other downstream 2092726 13942723 ~ 14050562 (-)
drp2 drp2,LOC107724836,LOC107593231 other upstream 60578 16203937 ~ 16365647 (-)
LOC103041988 rnf145,rnf145a,LOC107664350,LOC107669103,LOC107723822,LOC107740095 other upstream 1116427 17259786 ~ 17300993 (-)
LOC103033759 NA other upstream 1700607 17843966 ~ 17852191 (-)
LOC111195732 NA other upstream 1896316 18039675 ~ 18041939 (-)
G206575 NA other upstream 2695010 18838369 ~ 18838916 (-)

Expression


Co-expression Network