G51001


Basic Information

Item Value
gene id G51001
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 894655 ~ 894871 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU58074
TTCATGTTTGATTTTGATGTGACATAAAGCGGTGATATCTAAGTGGGTGAGCTGTTTACTTACTTAGCCTTCCCATTGACGCCATCATTTTGTTCATTCAAACCAACGCTCAGAACGCGCACATGAACAAGAGGTGGGATTTATCGCACAAACCAATCATATCCAATCACAGCGCGATGGAGGAACTGCCTCCTCTCACGTGACTTTCCCCCATTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58074 True 217 lncRNA 0.44 1 894655 894871

Neighbor

gene id symbol gene type direction distance location
CI01000009_00852319_00853083 CX45.6 coding upstream 41194 851242 ~ 853461 (+)
CI01000009_00805606_00808374 NA coding upstream 86251 804904 ~ 808404 (+)
CI01000009_00719164_00724772 SRPX coding upstream 169604 719164 ~ 725051 (+)
CI01000009_00704243_00710805 NA coding upstream 183850 704065 ~ 710805 (+)
CI01000009_00620687_00621072 NA coding upstream 273118 620687 ~ 621537 (+)
CI01000009_00913995_00916434 COMMD6 coding downstream 19124 913995 ~ 916565 (+)
CI01000009_00920570_00955979 TBC1D4 coding downstream 25557 920428 ~ 956574 (+)
CI01000009_01034561_01035452 KLF12 coding downstream 139690 1034561 ~ 1035728 (+)
CI01000009_01110684_01111118 NA coding downstream 215813 1110684 ~ 1111601 (+)
CI01000009_01183737_01206031 NA coding downstream 287220 1182091 ~ 1206857 (+)
G50954 NA non-coding upstream 13334 878271 ~ 881321 (+)
G50947 NA non-coding upstream 17234 874102 ~ 877421 (+)
G50984 NA non-coding upstream 53736 837940 ~ 840919 (+)
G50978 NA non-coding upstream 94796 799627 ~ 799859 (+)
G50973 NA non-coding upstream 107165 786884 ~ 787490 (+)
G50933 NA non-coding downstream 10461 905332 ~ 908981 (+)
G51017 NA non-coding downstream 78840 973711 ~ 973959 (+)
G51028 NA non-coding downstream 101173 996044 ~ 996272 (+)
G51031 NA non-coding downstream 106125 1000996 ~ 1001222 (+)
G50951 NA non-coding downstream 208407 1103278 ~ 1104484 (+)
G50920 NA other upstream 124422 769841 ~ 770233 (+)
CI01000009_00094836_00095813 NA other upstream 798868 94371 ~ 97230 (+)
CI01000009_01431700_01434463 NA other downstream 527976 1429873 ~ 1435328 (+)
G51122 NA other downstream 785275 1680146 ~ 1681966 (+)
CI01000009_01897343_01919208 PIKFYVE other downstream 999364 1897343 ~ 1919516 (+)
G51274 NA other downstream 1360228 2255099 ~ 2350486 (+)
G51529 NA other downstream 2167162 3062033 ~ 3062587 (+)

Expression


Co-expression Network