trnai-uau_43


Basic Information

Item Value
gene id trnai-uau_43
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 6532437 ~ 6532529 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnai-uau_43
GCTACTGTGGCGCAATCGGTTAGCGCGCGGTACTTATAATGCCGAGGTTGTGAGTTCGAGCCTCACCAGGAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnai-uau_43 True 74 tRNA 0.57 2 6532437 6532529

Neighbor

gene id symbol gene type direction distance location
LOC111195822 NA coding downstream 74898 6444206 ~ 6457539 (-)
LOC111188205 LOC108424126 coding downstream 87987 6435530 ~ 6444450 (-)
LOC103037435 NA coding downstream 96464 6432385 ~ 6435973 (-)
mif mif,LOC107680670,LOC107594949,LOC107594906 coding downstream 122798 6407479 ~ 6409639 (-)
clp1 clp1,LOC107750374,LOC107680590,LOC107749782,LOC107594950 coding downstream 131132 6393195 ~ 6401305 (-)
LOC111195712 NA coding upstream 471519 7004048 ~ 7013680 (-)
LOC103028028 NA coding upstream 1697562 8230091 ~ 8246950 (-)
fnta fnta,LOC107678656,LOC107715177,LOC106604549 coding upstream 2023869 8556398 ~ 8566032 (-)
snx25 snx25,LOC107556844 coding upstream 2043441 8575970 ~ 8648702 (-)
enpp6 enpp6 coding upstream 2119881 8652410 ~ 8667241 (-)
G203762 NA non-coding downstream 45533 6421950 ~ 6486904 (-)
G203763 NA non-coding downstream 108172 6422781 ~ 6424265 (-)
G203761 NA non-coding downstream 111470 6417268 ~ 6420967 (-)
LOC111195709 NA non-coding downstream 243505 6269259 ~ 6288932 (-)
G203745 NA non-coding downstream 257145 6255462 ~ 6275292 (-)
G203818 NA non-coding upstream 48793 6581322 ~ 6581736 (-)
G203819 NA non-coding upstream 53922 6586451 ~ 6587438 (-)
LOC111195711 NA non-coding upstream 241299 6773828 ~ 6777113 (-)
LOC111195828 NA non-coding upstream 507070 7039599 ~ 7040273 (-)
G203919 NA non-coding upstream 861285 7393814 ~ 7394180 (-)
trnai-uau_42 NA other downstream 769 6531576 ~ 6531668 (-)
trnai-uau_41 NA other downstream 1758 6530587 ~ 6530679 (-)
trnai-uau_40 NA other downstream 2306 6530039 ~ 6530131 (-)
selenoh selenoh other downstream 127149 6402156 ~ 6405288 (-)
LOC103032694 zdhhc5,zdhhc5b,LOC107594917,LOC107750372 other downstream 139671 6376735 ~ 6392766 (-)
jph3 jph3,LOC100148063,LOC107714052,LOC107654149,LOC107581833 other upstream 61849 6594378 ~ 6673928 (-)
map1lc3b NA other upstream 82075 6614604 ~ 6791991 (-)
LOC107197584 tenm2,LOC108268421,LOC108431098,LOC107752041,LOC107561160,LOC107670182 other upstream 924210 7456739 ~ 7743572 (-)
LOC103046444 LOC108431107 other upstream 3190873 9723402 ~ 9759067 (-)
G204584 NA other upstream 4111725 10644254 ~ 10644687 (-)

Expression


Co-expression Network