trnav-aac_55


Basic Information

Item Value
gene id trnav-aac_55
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 16629501 ~ 16629567 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnav-aac_55
GGTTCCATAGTGTAGTCACGTCTGCTTAACACGCAGAAGGTCCTGGGTTCGAGCCCCAGTGGAACCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnav-aac_55 True 67 tRNA 0.55 1 16629501 16629567

Neighbor

gene id symbol gene type direction distance location
trnav-uac_3 NA coding downstream 788 16628641 ~ 16628713 (-)
trnav-uac_2 NA coding downstream 1984 16627445 ~ 16627517 (-)
cstf2 cstf2,LOC107688691 coding downstream 2387 16604417 ~ 16627114 (-)
trnav-uac_1 NA coding downstream 3186 16626243 ~ 16626315 (-)
arl13a arl13a coding downstream 83809 16535765 ~ 16545692 (-)
trnav-uac_4 NA coding upstream 1412 16630979 ~ 16631051 (-)
LOC103041961 LOC108427811 coding upstream 83465 16713032 ~ 16715374 (-)
tspan6 tspan6 coding upstream 90905 16720472 ~ 16726339 (-)
sytl4 sytl4 coding upstream 117625 16747192 ~ 16773307 (-)
trmt12 NA coding upstream 146905 16776472 ~ 16781235 (-)
G205883 NA non-coding downstream 97634 16531511 ~ 16531867 (-)
G205859 NA non-coding downstream 226421 16401078 ~ 16403080 (-)
G205814 NA non-coding downstream 281942 16343241 ~ 16347559 (-)
G205812 NA non-coding downstream 429498 16196106 ~ 16200003 (-)
G205800 NA non-coding downstream 562785 16065584 ~ 16066716 (-)
G205997 NA non-coding upstream 115653 16745220 ~ 16745579 (-)
G206002 NA non-coding upstream 121255 16750822 ~ 16775704 (-)
G206006 rnaseh2c non-coding upstream 152559 16782126 ~ 16785058 (-)
G206004 NA non-coding upstream 157110 16786677 ~ 16787388 (-)
G206007 NA non-coding upstream 163489 16793056 ~ 16798716 (-)
drp2 drp2,LOC107724836,LOC107593231 other downstream 263854 16203937 ~ 16365647 (-)
G205670 NA other downstream 797407 15831650 ~ 15832094 (-)
pcdh19 pcdh19,LOC107680972,LOC107740148,LOC107688683 other downstream 1061866 15407944 ~ 15567635 (-)
G205640 NA other downstream 1083879 15543917 ~ 15545622 (-)
LOC103035169 LOC108427892,LOC107740141,LOC107554835,LOC107593202,LOC108268827 other downstream 2651051 13974677 ~ 13978450 (-)
LOC103041988 rnf145,rnf145a,LOC107664350,LOC107669103,LOC107723822,LOC107740095 other upstream 630219 17259786 ~ 17300993 (-)
LOC103033759 NA other upstream 1214399 17843966 ~ 17852191 (-)
LOC111195732 NA other upstream 1410108 18039675 ~ 18041939 (-)
G206575 NA other upstream 2208802 18838369 ~ 18838916 (-)
thoc2 thoc2,LOC107733416,LOC107741598 other upstream 2408127 19037694 ~ 19127726 (-)

Expression


Co-expression Network