G33211


Basic Information

Item Value
gene id G33211
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 270650 ~ 306318 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU44599
acacacacacacacacacacacacgcacacacacacacacacacgatatGAGCAGGGACCAACAGGCTTTCAGTGATATGCAGTGAACAGTCATGgtttcagtgagtgtgtgagtctTAGTCTAGGATGAACACATAAAGCTCTCAGTCAAGGTTAATAGTTGTATCTTTAAGGATTCAAATAGTACAGGTGGTAATTCATGCAAGTCCTAGCAACCAAGACGTTCCAAAAGTTTAATTTCACTACAGGAAATCAGTGTGTGCTTAACTGTAAAAAGTCAAATACTTTCTGTTTCTTTATCTCAGATACAACAATGATACTGAAGTCTATGGTGCTACCATGTTTACTCCAATACTGCATTGCCCCTgtactgttttatgtttatttctgCTCATCCAAACCTGATTTAGCTCAGGAAATTGAAGATAAACAGAAACAAGACTAAAGGTACCAAACACTGCAAAATACTGATTGGCAAGGGGGAACATATCAAACATCTCTAATTACTCTAGTTTCATATATAATTTTGctaattttaagattttaccaaattgaaaacctctggaatataatcaagagaaagatggatgtttgaatttttgcaccaggagtggcataaagttatccaaaagcagtgtgtaagactgctggaggagaacctgcaaagatgcatgaaaactgtgattaaaaacctttttattccattgatttctgaactcttaaaactgtatgaatataaacttgttttctttgcataatttgaggtctgaaagctctgcatctttttttgttatttcagctgtttctcATGTTccgaaaataaatgctctaaatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44599 True 835 lncRNA 0.36 2 270650 306318

Neighbor

gene id symbol gene type direction distance location
htr7 htr7,LOC107758424,LOC107669182,LOC107594208,LOC107584235,LOC107753458,LOC107683721 coding upstream 223087 42719 ~ 47563 (+)
LOC103045384 si:dkey-100n10.2,LOC108424892,LOC107758432,LOC107584158,LOC107661094,LOC108273498,LOC107727700 coding downstream 150853 457171 ~ 483231 (+)
acbd4 LOC107662569 coding downstream 429510 735828 ~ 745143 (+)
LOC103047415 LOC103469343 coding downstream 446270 752588 ~ 754996 (+)
LOC103022594 LOC108424886 coding downstream 531987 838305 ~ 850262 (+)
trnac-gca_9 NA coding downstream 575049 881367 ~ 881438 (+)
G33160 NA non-coding upstream 212462 57629 ~ 58188 (+)
G33147 NA non-coding upstream 231634 38493 ~ 39016 (+)
G33141 NA non-coding upstream 246788 21445 ~ 23862 (+)
G33231 NA non-coding downstream 55109 361427 ~ 362460 (+)
G33235 NA non-coding downstream 63347 369665 ~ 372776 (+)
G33246 NA non-coding downstream 89793 396111 ~ 401312 (+)
G33256 NA non-coding downstream 178775 485093 ~ 485304 (+)
G33312 si:dkeyp-94b4.1,LOC108424890,LOC107758427,LOC107675649 non-coding downstream 194159 500477 ~ 576299 (+)
hectd2 hectd2,LOC107584154,LOC107594154,LOC107758436,LOC107753452 other upstream 38733 181069 ~ 231917 (+)
LOC103039306 pcgf5,LOC108410714,LOC106589380 other upstream 104260 128356 ~ 166390 (+)
rpp30 rpp30 other upstream 169599 96303 ~ 101051 (+)
LOC111192417 NA other downstream 112692 419010 ~ 424471 (+)
LOC103023950 LOC103023950,LOC108424882,LOC108273447,LOC103382057,LOC106536190 other downstream 676849 983167 ~ 985381 (+)
trnal-aag NA other downstream 685994 992312 ~ 992518 (+)
LOC111192342 dnah9 other downstream 1062855 1369173 ~ 1388019 (+)
amz2 amz2 other downstream 1744424 2050742 ~ 2056963 (+)

Expression


Co-expression Network