trnal-aag


Basic Information

Item Value
gene id trnal-aag
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 992312 ~ 992518 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU45046
CgtggccgagcggtctaaggcgctggaTTAAGGCTCCAGTCTCTTCGGGggcgtgggttcgaatcccaccGCTGCCAACACGTTttgaacgtgtgtgtgttttcaagTTGCGCTGGTATTATGTAACTATTTCAGGGCTAAATATGATTAGAAACGTCAGCCCTATACGacttacaatttaaaaaatgcatgtatAGCGAGG
>trnal-aag
GGTAGCgtggccgagcggtctaaggcgctggaTTAAGGCTCCAGTCTCTTCGGGggcgtgggttcgaatcccaccGCTGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45046 True 202 lncRNA 0.39 1 992317 992518
trnal-aag False 82 tRNA 0.65 1 992312 992393

Neighbor

gene id symbol gene type direction distance location
LOC103026642 LOC108424836 coding upstream 18830 970636 ~ 973482 (+)
trnac-gca_9 NA coding upstream 110874 881367 ~ 881438 (+)
LOC103022594 LOC108424886 coding upstream 142050 838305 ~ 850262 (+)
LOC103047415 LOC103469343 coding upstream 237316 752588 ~ 754996 (+)
acbd4 LOC107662569 coding upstream 247169 735828 ~ 745143 (+)
LOC103037439 LOC108424843 coding downstream 122070 1114588 ~ 1120630 (+)
trnar-ucg NA coding downstream 128878 1121396 ~ 1121468 (+)
trnam-cau_18 NA coding downstream 129283 1121801 ~ 1121872 (+)
wdr45b wdr45b,LOC107598578 coding downstream 137437 1129955 ~ 1138168 (+)
foxk2 foxk2,LOC107719587 coding downstream 145921 1138439 ~ 1156171 (+)
G33454 NA non-coding upstream 1218 988920 ~ 991094 (+)
G33413 lasp1,LOC108424884,LOC108274031,LOC105905439,LOC108258608,LOC107567378,LOC107745925 non-coding upstream 47843 858648 ~ 944469 (+)
G33426 NA non-coding upstream 70754 912388 ~ 921558 (+)
G33329 NA non-coding upstream 380201 606044 ~ 612111 (+)
LOC103046496 NA non-coding upstream 416168 559561 ~ 576144 (+)
LOC111192341 NA non-coding downstream 46524 1039042 ~ 1046503 (+)
LOC111192399 NA non-coding downstream 192547 1185065 ~ 1221130 (+)
G33511 NA non-coding downstream 350892 1343410 ~ 1344921 (+)
LOC111192343 NA non-coding downstream 555157 1547675 ~ 1557290 (+)
G33609 NA non-coding downstream 735603 1728121 ~ 1731958 (+)
LOC103023950 LOC103023950,LOC108424882,LOC108273447,LOC103382057,LOC106536190 other upstream 6931 983167 ~ 985381 (+)
LOC111192417 NA other upstream 567841 419010 ~ 424471 (+)
hectd2 hectd2,LOC107584154,LOC107594154,LOC107758436,LOC107753452 other upstream 760395 181069 ~ 231917 (+)
LOC103039306 pcgf5,LOC108410714,LOC106589380 other upstream 825922 128356 ~ 166390 (+)
rpp30 rpp30 other upstream 891261 96303 ~ 101051 (+)
LOC111192342 dnah9 other downstream 376655 1369173 ~ 1388019 (+)
amz2 amz2 other downstream 1058224 2050742 ~ 2056963 (+)
tbkbp1 tbkbp1,LOC107565677,LOC107754096,LOC107677885,LOC107743771 other downstream 2571512 3564030 ~ 3659132 (+)
G34309 NA other downstream 3178533 4171051 ~ 4178083 (+)
LOC103025551 sema4g other downstream 3890038 4882556 ~ 4924766 (+)

Expression


Co-expression Network