G33731


Basic Information

Item Value
gene id G33731
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 1975829 ~ 1976108 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU45402
attattaattcatgtttaagttttaatgaccataccgatagtgttcctaatgaagtaattcttatctatttatgtcaatagtagagagatagacaataaaggacagcaacatcagagacagacaatggagggcagcaacagagacaatggaacaaagcaacagacaactgaggtgagcaacagagacagacaatgaagtcacatcacagatgtaggaagtttgagtaacacttacatttatatcaaatttatgttaacagtggggagcaacagacgaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45402 True 280 lncRNA 0.43 1 1975829 1976108

Neighbor

gene id symbol gene type direction distance location
xrcc6 xrcc6,LOC107709651,LOC107554059 coding downstream 71200 1898185 ~ 1904629 (-)
LOC103046112 NA coding downstream 79836 1890271 ~ 1895993 (-)
josd1 josd1,LOC107660868 coding downstream 86550 1879258 ~ 1889279 (-)
cbx7 cbx7,LOC103382143,LOC107554058,LOC107660863,LOC107584093,LOC107709653,LOC106608943 coding downstream 97620 1870610 ~ 1878209 (-)
LOC103040308 NA coding downstream 138545 1825489 ~ 1837284 (-)
LOC103047336 LOC108444256 coding upstream 1506 1977614 ~ 2017175 (-)
LOC103022929 slc16a6,LOC108444260 coding upstream 79992 2056100 ~ 2066246 (-)
LOC103023976 snx11,LOC103023976,LOC108444262,LOC105888804 coding upstream 98522 2074630 ~ 2087567 (-)
snf8 snf8,LOC107692042,LOC107734219,LOC107554070 coding upstream 141432 2117540 ~ 2120383 (-)
chmp2a chmp2a,bc2,LOC107552765,LOC107727322,LOC107582752,LOC106589279 coding upstream 154910 2131018 ~ 2134043 (-)
G33693 LOC108413510,LOC108273944,LOC100698988 non-coding downstream 112317 1862786 ~ 1863512 (-)
G33690 LOC108413510 non-coding downstream 118114 1856968 ~ 1857715 (-)
LOC111192345 NA non-coding downstream 248572 1720811 ~ 1727257 (-)
LOC111192344 NA non-coding downstream 255383 1718648 ~ 1720446 (-)
G33545 NA non-coding downstream 801174 1174440 ~ 1174655 (-)
G33732 NA non-coding upstream 221 1976329 ~ 1976585 (-)
G33759 NA non-coding upstream 98227 2074335 ~ 2074606 (-)
LOC111192348 NA non-coding upstream 104867 2080975 ~ 2083243 (-)
G33804 LOC108444266 non-coding upstream 152159 2128267 ~ 2130172 (-)
G33833 NA non-coding upstream 215982 2192090 ~ 2192968 (-)
G33675 NA other downstream 163207 1810586 ~ 1812622 (-)
LOC111192416 NA other downstream 1574517 389434 ~ 401312 (-)
LOC103022010 rgs9b,LOC108444257,LOC107660859,LOC107734240,LOC107584086,LOC107709642,LOC107692097,LOC108273767,LOC105888735 other upstream 45963 2022071 ~ 2042303 (-)
G33823 srcap other upstream 192915 2169023 ~ 2177059 (-)
G33836 LOC103393566,LOC105888730 other upstream 218649 2194757 ~ 2196095 (-)
G33904 NA other upstream 327154 2303262 ~ 2309329 (-)
G34046 NA other upstream 1205060 3181168 ~ 3194377 (-)

Expression


Co-expression Network