G33732


Basic Information

Item Value
gene id G33732
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 1976329 ~ 1976585 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU45403
gaatgcggacatgttatacaccattcgaaccgtctgcctctccggattacggaactgtgtttagagtttaaatctgcttgtgtttcgctttgtgtttacctcaggacactcgagacacacacccaaccccctccagcgcttcccccacactcttaccttcaaaacgcctccaaacttaagaaaatccatcaatccagtcaccagtaattctcacatatatccaaacagtgcttgaaataatttgaggcagaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45403 True 257 lncRNA 0.44 1 1976329 1976585

Neighbor

gene id symbol gene type direction distance location
xrcc6 xrcc6,LOC107709651,LOC107554059 coding downstream 71700 1898185 ~ 1904629 (-)
LOC103046112 NA coding downstream 80336 1890271 ~ 1895993 (-)
josd1 josd1,LOC107660868 coding downstream 87050 1879258 ~ 1889279 (-)
cbx7 cbx7,LOC103382143,LOC107554058,LOC107660863,LOC107584093,LOC107709653,LOC106608943 coding downstream 98120 1870610 ~ 1878209 (-)
LOC103040308 NA coding downstream 139045 1825489 ~ 1837284 (-)
LOC103047336 LOC108444256 coding upstream 1029 1977614 ~ 2017175 (-)
LOC103022929 slc16a6,LOC108444260 coding upstream 79515 2056100 ~ 2066246 (-)
LOC103023976 snx11,LOC103023976,LOC108444262,LOC105888804 coding upstream 98045 2074630 ~ 2087567 (-)
snf8 snf8,LOC107692042,LOC107734219,LOC107554070 coding upstream 140955 2117540 ~ 2120383 (-)
chmp2a chmp2a,bc2,LOC107552765,LOC107727322,LOC107582752,LOC106589279 coding upstream 154433 2131018 ~ 2134043 (-)
G33731 NA non-coding downstream 221 1975829 ~ 1976108 (-)
G33693 LOC108413510,LOC108273944,LOC100698988 non-coding downstream 112817 1862786 ~ 1863512 (-)
G33690 LOC108413510 non-coding downstream 118614 1856968 ~ 1857715 (-)
LOC111192345 NA non-coding downstream 249072 1720811 ~ 1727257 (-)
LOC111192344 NA non-coding downstream 255883 1718648 ~ 1720446 (-)
G33759 NA non-coding upstream 97750 2074335 ~ 2074606 (-)
LOC111192348 NA non-coding upstream 104390 2080975 ~ 2083243 (-)
G33804 LOC108444266 non-coding upstream 151682 2128267 ~ 2130172 (-)
G33833 NA non-coding upstream 215505 2192090 ~ 2192968 (-)
G33835 NA non-coding upstream 217702 2194287 ~ 2194607 (-)
G33675 NA other downstream 163707 1810586 ~ 1812622 (-)
LOC111192416 NA other downstream 1575017 389434 ~ 401312 (-)
LOC103022010 rgs9b,LOC108444257,LOC107660859,LOC107734240,LOC107584086,LOC107709642,LOC107692097,LOC108273767,LOC105888735 other upstream 45486 2022071 ~ 2042303 (-)
G33823 srcap other upstream 192438 2169023 ~ 2177059 (-)
G33836 LOC103393566,LOC105888730 other upstream 218172 2194757 ~ 2196095 (-)
G33904 NA other upstream 326677 2303262 ~ 2309329 (-)
G34046 NA other upstream 1204583 3181168 ~ 3194377 (-)

Expression


Co-expression Network