G33748


Basic Information

Item Value
gene id G33748
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 2087959 ~ 2088160 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU45432
GTTTGACTTGGTTTAATGTTGCCTTTAgctctatctggacgggattagtttcttaagGAGTCCTGGGGTAATTTGCTCTTTTAGGGGagttcctctgtgattttattctcatctggaacgaccatgtacgtgtttttcccagaagtcctctgagaaaattacaggctgaataactctgtggtcctctggtaattttagtccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45432 True 202 lncRNA 0.42 1 2087959 2088160

Neighbor

gene id symbol gene type direction distance location
arsg arsg coding upstream 13706 2066377 ~ 2074253 (+)
LOC103022306 LOC108444258,LOC108273768,LOC107734232,LOC107660858,LOC107584085 coding upstream 38170 2043565 ~ 2049789 (+)
LOC103047034 shisa8 coding upstream 120619 1930168 ~ 1967340 (+)
LOC103046730 desi1 coding upstream 178228 1905033 ~ 1909731 (+)
LOC103044365 LOC108273944,LOC108413510 coding upstream 219308 1846203 ~ 1868651 (+)
LOC103025124 si:dkey-220f10.4,LOC108444253,LOC107692044,LOC107660871,LOC107554063,LOC102785326 coding downstream 397 2088557 ~ 2097830 (+)
LOC103026481 stx4,LOC103026481,LOC108444263,LOC108274127,LOC106579303 coding downstream 10995 2099155 ~ 2107129 (+)
calcoco2 NA coding downstream 20311 2108471 ~ 2117195 (+)
LOC103026968 LOC108444266 coding downstream 37460 2125620 ~ 2130212 (+)
LOC103028296 LOC108444267 coding downstream 47036 2135196 ~ 2148906 (+)
G33747 NA non-coding upstream 428 2085643 ~ 2087531 (+)
G33737 NA non-coding upstream 57858 2028333 ~ 2030101 (+)
G33623 NA non-coding upstream 216056 1868930 ~ 1871903 (+)
G33611 map2k4,LOC108424869,LOC108274195,LOC103366173,LOC107719678,LOC107556463 non-coding upstream 351982 1732926 ~ 1735977 (+)
G33609 NA non-coding upstream 356001 1728121 ~ 1731958 (+)
G33754 snf8,LOC107692042,LOC107660854,LOC107734219 non-coding downstream 29407 2117567 ~ 2119530 (+)
G33788 NA non-coding downstream 35727 2123887 ~ 2124173 (+)
G33791 chmp2a,bc2,LOC107552765,LOC107727322,LOC107582752,LOC106589279 non-coding downstream 42514 2130674 ~ 2134078 (+)
G33849 psme3,LOC107582747,LOC107727296,LOC107669474,LOC107706898,LOC107666924 non-coding downstream 188608 2276768 ~ 2281249 (+)
G33875 NA non-coding downstream 245583 2333743 ~ 2334085 (+)
amz2 amz2 other upstream 30996 2050742 ~ 2056963 (+)
LOC111192342 dnah9 other upstream 699940 1369173 ~ 1388019 (+)
trnal-aag NA other upstream 1095441 992312 ~ 992518 (+)
LOC103023950 LOC103023950,LOC108424882,LOC108273447,LOC103382057,LOC106536190 other upstream 1102578 983167 ~ 985381 (+)
LOC111192417 NA other upstream 1663488 419010 ~ 424471 (+)
tbkbp1 tbkbp1,LOC107565677,LOC107754096,LOC107677885,LOC107743771 other downstream 1475870 3564030 ~ 3659132 (+)
G34309 NA other downstream 2082891 4171051 ~ 4178083 (+)
LOC103025551 sema4g other downstream 2794396 4882556 ~ 4924766 (+)
dnmbp dnmbp,LOC107722208,LOC107684043 other downstream 3604362 5692522 ~ 5756116 (+)
LOC103045604 LOC108426437,LOC107683136 other downstream 4158486 6246646 ~ 6258050 (+)

Expression


Co-expression Network