G33904


Basic Information

Item Value
gene id G33904
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 2303262 ~ 2309329 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU45650
GTCAAACTCCTGCAGAGCAGGGTCAGTGTGGTCACTGGAGTGCACAGACTCTTCAGAGGGCTGAAGCTGGTCTTTCACCCGGTGGTGTAAAATGTCAGCTATGCACTGGGAGGCCCGCCGCCGTCAGCATGTTCTGGACCGAAGGATGGCCTCCAGAAGCAGGCAGGGTCTTACAGCGGACATGCAGAAGCAAAGCTCCGTGGAAAAGAGCCAAAGTGAGACACCTGTAACATCCTCAGTGTCCAGTGAACCTCTGGTAGCTGATAAGAAGATTCTCTGCAGCTGTCAGCTTGAAAAGAGAGAGCAATACAGCGCCAAGATTGACAACAGATACACAtCTATACAGTATTCCCAACAATGGTGAAGATGAGGGCTACAGATATTACTACGGTTCCACAGTGCAATATACATGCTGCTGGTATAACATTGAACATATTTAACTTAACA

Function

GO: NA

KEGG:

id description
ko04978 Mineral absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU45650 True 447 TUCP 0.45 5 2303262 2309329

Neighbor

gene id symbol gene type direction distance location
psme3 psme3,LOC107582747,LOC107727296,LOC107669474,LOC107706898,LOC107666924 coding downstream 20278 2276757 ~ 2282984 (-)
chmp2a chmp2a,bc2,LOC107552765,LOC107727322,LOC107582752,LOC106589279 coding downstream 169219 2131018 ~ 2134043 (-)
snf8 snf8,LOC107692042,LOC107734219,LOC107554070 coding downstream 182879 2117540 ~ 2120383 (-)
LOC103023976 snx11,LOC103023976,LOC108444262,LOC105888804 coding downstream 215695 2074630 ~ 2087567 (-)
LOC103022929 slc16a6,LOC108444260 coding downstream 237016 2056100 ~ 2066246 (-)
dhx8 dhx8,LOC107706906 coding upstream 315609 2624938 ~ 2637751 (-)
LOC111192418 NA coding upstream 912018 3221347 ~ 3222998 (-)
ogfod3 ogfod3,LOC106959269 coding upstream 1031283 3340612 ~ 3380599 (-)
LOC103047433 psmd11,LOC108426450,LOC107743775,LOC107568948,LOC107691212,LOC103367354 coding upstream 1073446 3382775 ~ 3390578 (-)
myo1d myo1d,si:ch211-94l19.4,LOC107743773 coding upstream 1094618 3403947 ~ 3532389 (-)
G33853 nbr1,LOC108413416,LOC108273956 non-coding downstream 15834 2286270 ~ 2287428 (-)
G33835 NA non-coding downstream 108655 2194287 ~ 2194607 (-)
G33833 NA non-coding downstream 110294 2192090 ~ 2192968 (-)
G33804 LOC108444266 non-coding downstream 173090 2128267 ~ 2130172 (-)
LOC111192348 NA non-coding downstream 220019 2080975 ~ 2083243 (-)
G33909 NA non-coding upstream 9279 2318608 ~ 2318897 (-)
G33911 NA non-coding upstream 23945 2333274 ~ 2334121 (-)
G33910 NA non-coding upstream 53021 2362350 ~ 2367740 (-)
G33939 NA non-coding upstream 205958 2515287 ~ 2544111 (-)
G33944 etv4,LOC107743788 non-coding upstream 265058 2574387 ~ 2603189 (-)
G33836 LOC103393566,LOC105888730 other downstream 107167 2194757 ~ 2196095 (-)
G33823 srcap other downstream 126203 2169023 ~ 2177059 (-)
LOC103022010 rgs9b,LOC108444257,LOC107660859,LOC107734240,LOC107584086,LOC107709642,LOC107692097,LOC108273767,LOC105888735 other downstream 260959 2022071 ~ 2042303 (-)
G33675 NA other downstream 490640 1810586 ~ 1812622 (-)
LOC111192416 NA other downstream 1901950 389434 ~ 401312 (-)
G34046 NA other upstream 871839 3181168 ~ 3194377 (-)
prr15l prr15l other upstream 1473796 3783125 ~ 3789192 (-)
G34214 NA other upstream 1527292 3836621 ~ 3883469 (-)
psme4 psme4,psme4b,LOC108426507,LOC107584369,LOC107749369 other upstream 2662369 4971698 ~ 4995913 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107566231,LOC106949585 other upstream 2946290 5255619 ~ 5362486 (-)

Expression


Co-expression Network