G34046


Basic Information

Item Value
gene id G34046
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 3181168 ~ 3194377 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU45820
gtattattcaaaatataacaggacctactcattactgtaatcatactctggatttagttttgaccctgggtgtgagcatagataacccgaatattcgttctcaaacctccgcaatttcagatcattaccttatttcatttaaattacatcttagtcataatatacgtacatcccctagctactctgtaaaacgttcatttacgccttttacagcccaacaatttacagataagcttccagacttatcaactctaatgtactctcctatagacccagtagaactagacaaactaaccgaaggtttagaaaatacctttcgctctaccttagatgttgtagcaccccttaaacacaaaatagagagacagaaaaagctcgcaccgtggtacaatgatcaaactcgtaccttaaagcagttagtacgtaatttagagcgtaaatatcgatcaactaaactggaagtgtttcactctgcgtggaaagacagtcttgttaaatatagaaaagaacttaataaagcccgctcagcatatctggcctcacagatcgagataaataaaaataatcctagagttctctttagtgttatttccaaattaactaaaaaccaggcaggtactgaacctcagattccagccatttacACCAGGGGGCCCcccagcaacgattttatggacttcttcaatagtaaaattgaaaacattcgggataaaattaaacagataaatattacagtgtgtgtttgtgtgtgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45820 True 758 TUCP 0.25 2 3181168 3194377

Neighbor

gene id symbol gene type direction distance location
dhx8 dhx8,LOC107706906 coding downstream 543417 2624938 ~ 2637751 (-)
psme3 psme3,LOC107582747,LOC107727296,LOC107669474,LOC107706898,LOC107666924 coding downstream 898184 2276757 ~ 2282984 (-)
chmp2a chmp2a,bc2,LOC107552765,LOC107727322,LOC107582752,LOC106589279 coding downstream 1047125 2131018 ~ 2134043 (-)
snf8 snf8,LOC107692042,LOC107734219,LOC107554070 coding downstream 1060785 2117540 ~ 2120383 (-)
LOC103023976 snx11,LOC103023976,LOC108444262,LOC105888804 coding downstream 1093601 2074630 ~ 2087567 (-)
LOC111192418 NA coding upstream 26970 3221347 ~ 3222998 (-)
ogfod3 ogfod3,LOC106959269 coding upstream 146235 3340612 ~ 3380599 (-)
LOC103047433 psmd11,LOC108426450,LOC107743775,LOC107568948,LOC107691212,LOC103367354 coding upstream 188398 3382775 ~ 3390578 (-)
myo1d myo1d,si:ch211-94l19.4,LOC107743773 coding upstream 209570 3403947 ~ 3532389 (-)
LOC103046317 LOC103046317,LOC108426453,LOC107565668,LOC107754097,LOC107677886,LOC108274275,LOC107743772 coding upstream 351056 3545433 ~ 3555219 (-)
G34036 NA non-coding downstream 95762 3060369 ~ 3085406 (-)
G33944 etv4,LOC107743788 non-coding downstream 577979 2574387 ~ 2603189 (-)
G33939 NA non-coding downstream 637057 2515287 ~ 2544111 (-)
G33910 NA non-coding downstream 813428 2362350 ~ 2367740 (-)
G33911 NA non-coding downstream 847047 2333274 ~ 2334121 (-)
G34101 NA non-coding upstream 197252 3391629 ~ 3399113 (-)
G34159 NA non-coding upstream 534265 3728642 ~ 3728960 (-)
G34166 pnpo non-coding upstream 583523 3777900 ~ 3781741 (-)
G34218 rnf40,LOC108273672,LOC107743762,LOC107677883,LOC107563784,LOC107565773 non-coding upstream 645626 3840003 ~ 3842727 (-)
LOC103038927 NA non-coding upstream 686205 3880582 ~ 3883412 (-)
G33904 NA other downstream 871839 2303262 ~ 2309329 (-)
G33836 LOC103393566,LOC105888730 other downstream 985073 2194757 ~ 2196095 (-)
G33823 srcap other downstream 1004109 2169023 ~ 2177059 (-)
LOC103022010 rgs9b,LOC108444257,LOC107660859,LOC107734240,LOC107584086,LOC107709642,LOC107692097,LOC108273767,LOC105888735 other downstream 1138865 2022071 ~ 2042303 (-)
G33675 NA other downstream 1368546 1810586 ~ 1812622 (-)
prr15l prr15l other upstream 588748 3783125 ~ 3789192 (-)
G34214 NA other upstream 642244 3836621 ~ 3883469 (-)
psme4 psme4,psme4b,LOC108426507,LOC107584369,LOC107749369 other upstream 1777321 4971698 ~ 4995913 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107566231,LOC106949585 other upstream 2061242 5255619 ~ 5362486 (-)
ccdc186 ccdc186,LOC107755417,LOC107689962 other upstream 2709211 5903588 ~ 5928154 (-)

Expression


Co-expression Network