prr15l (prr15l)


Basic Information

Item Value
gene id prr15l
gene name prr15l
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 3783125 ~ 3789192 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU45984
aatctgGCAGATCATGTCAACACCTGAGCACCAAATGAAAGCATTCAATCACAGTGAGATTGATTAAGAacggagacagacacagacagacaaccTTCAAAGATCTTGACAGAGACATTGTgcacaagaaaagaaaagaaaataaaagaaaaaagaagaaaaaaggaaacagcTGGTAGATGATACGTGCAGCAAACATCTGACTTCATGTGGACTTCATTCTGACTTCATCTATTCACCTGAAACAGGACTGCTTTTAAATCAGGCCTGCGATATTCATCCAGCCCATTTTCACGCGCCATGGCTGAACCTGCCTGGTGGAAGCTGACCTTCTCGAGGAAGAAGTCGTCTGAGTCCAAGGTCCTGTATGAAATCCCCGCAGAATATGGCAGCAACACTGGCAATAAAGAACTCTCCTACACAGATAGCACTGACAGCCAGCTAGATGCCAGGCTGGAGAAGATTGTGGACAAGTCTGCCAACAAAGGCCGTCACGTCAAAGTCTCGCACTCTGGCCGCTtcaaggagaagaagaagattcGAGCCACCCTTGCTGAAAATCCCAGTATGTTCCCAGAGTACAACAGGACTGATGAGAACCATGTGGTAGAGAAATAGAATCCACTCTACTAAACAAAAAGTGTCTTTCATCatcactcagacacacactccCGTCTGTTAATTAGCATGATGAAAGGAAAATACATGGGTTTAGAATGAAGATGAATATGTTGCTGcaaaacacacctgatccagccACAGGATCAGGAGAGTTCAAACTTGTACAAAGAAATGAAAGAGATTAATGAACAAAATCTCTTAATTTTATACGGGGTCTaatttaaaagctttgttttaaaaactctgtacgtctttatttaatttgaatatttaatTGGTCCAAGGTTTTGTTGCTCAGTCTACAAAGATACATACGAGCATTACTCCTCAAAACCcactttattttgtatatttagtattttttaggCTGGGTTCTTTTTAGGCTGGATTTTAGATGCTTACTGGTGTTTGTGCTTGTTAATACATGTTTTCATTGTGTGTAAAGCAGCATTGATGtggtaaaatactgtaaatgttaaataaatgaaactgca
>TU45985
ATTTACTCAAGTTGCAAAGGGCTGTCCCTAATGTTCAGCTTGGACTGCAACTCTTGTGGGAGGCTGCATCAGCTAGATAggctgtgtgcatgtgtgtgtgtatgtgtgtgtctgtgtgtgtgtgtgtaaatctgGCAGATCATGTCAACACCTGAGCACCAAATGAAAGCATTCAATCACAGTGAGATTGATTAAGAacggagacagacacagacagacaaccTTCAAAGATCTTGACAGAGACATTGTgcacaagaaaagaaaagaaaataaaagaaaaaagaagaaaaaaggaaacagcTGGTAGATGATACGTGCAGCAAACATCTGACTTCATGTGGACTTCATTCTGACTTCATCTATTCACCTGAAACAGGACTGCTTTTAAATCAGGCCTGCGATATTCATCCAGCCCATTTTCACGCGCCATGGCTGAACCTGCCTGGTGGAAGCTGACCTTCTCGAGGAAGAAGTCGTCTGAGTCCAAGGTCCTGTATGAAATCCCCGCAGAATATGGCAGCAACACTGGCAATAAAGAACTCTCCTACACAGATAGCACTGACAGCCAGCTAGATGCCAGGCTGGAGAAGATTGTGGACAAGTCTGCCAACAAAGGCCGTCACGTCAAAGTCTCGCACTCTGGCCGCTtcaaggagaagaagaagattcGAGCCACCCTTGCTGAAAATCCCAGTATGTTCCCAGAGTACAACAGGACTGATGAGAACCATGTGGTAGAGAAATAGAATCCACTCTACTAAACAAAAAGTGTCTTTCATCatcactcagacacacactccCGTCTGTTAATTAGCATGATGAAAGGAAAATACATGGGTTTAGAATGAAGATGAATATGTTGCTGcaaaacacacctgatccagccACAGGATCAGGAGAGTTCAAACTTGTACAAAGAAATGAAAGAGATTAATGAACAAAATCTCTTAATTTTATACGGGGTCTaatttaaaagctttgttttaaaaactctgtacgtctttatttaatttgaatatttaatTGGTCCAAGGTTTTGTTGCTCAGTCTACAAAGATACATACGAGCATTACTCCTCAAAACCcactttattttgtatatttagtattttttaggCTGGGTTCTTTTTAGGCTGGATTTTAGATGCTTACTGGTGTTTGTGCTTGTTAATACATGTTTTCATTGTGTGTAAAGCAGCATTGATGtggtaaaatactgtaaatgttaaataaatgaaactgcaTATTGGATGTTTTAGACATGACAATGACAATGACAAATACTGCTGCTATCAtgcaaattcttttttttttttacataatctgAACATTTTTATGATGACAGAGCaaaagcaatgctccaaaactaCTTGTATTAATTTCCCTTCAAAGTTTACCTGTCCTCCTGTAAAattgtaaagttgctattttgtagttttttgtgtgacagcagTGATATAATGTTCAGATGActgaatatactgaaatatgaaaaatgctTCTATTCTTAAATAAATTTGACAAGGT
>TU45986
tgcatgtgtgtgtgtatgtgtgtgtctgtgtgtgtgtgtgtaaatctgGCAGATCATGTCAACACCTGAGCACCAAATGAAAGCATTCAATCACAGTGAGATTGATTAAGAacggagacagacacagacagacaaccTTCAAAGATCTTGACAGAGACATTGTgcacaagaaaagaaaagaaaataaaagaaaaaagaagaaaaaaggaaacagcTGGTAGATGATACGTGCAGCAAACATCTGACTTCATGTGGACTTCATTCTGACTTCATCTATTCACCTGAAACAGGACTGCTTTTAAATCAGGCCTGCGATATTCATCCAGCCCATTTTCACGCGCCATGGCTGAACCTGCCTGGTGGAAGCTGACCTTCTCGAGGAAGAAGTCGTCTGAGTCCAAGGTCCTGTATGAAATCCCCGCAGAATATGGCAGCAACACTGGCAATAAAGAACTCTCCTACACAGATAGCACTGACAGCCAGCTAGATGCCAGGCTGGAGAAGATTGTGGACAAGTCTGCCAACAAAGGCCGTCACGTCAAAGTCTCGCACTCTGGCCGCTtcaaggagaagaagaagattcGAGCCACCCTTGCTGAAAATCCCAGTATGTTCCCAGAGTACAACAGGACTGATGAGAACCATGTGGTAGAGAAATAGAATCCACTCTACTAAACAAAAAGTGTCTTTCATCatcactcagacacacactccCGTCTGTTAATTAGCATGATGAAAGGAAAATACATGGGTTTAGAATGAAGATGAATATGTTGCTGcaaaacacacctgatccagccACAGGATCAGGAGAGTTCAAACTTGTACAAAGAAATGAAAGAGATTAATGAACAAAATCTCTTAATTTTATACGGGGTCTaatttaaaagctttgttttaaaaactctgtacgtctttatttaatttgaatatttaatTGGTCCAAGGTTTTGTTGCTCAGTCTACAAAGATACATACGAGCATTACTCCTCAAAACCcactttattttgtatatttagtattttttaggCTGGGTTCTTTTTAGGCTGGATTTTAGATGCTTACTGGTGTTTGTGCTTGTTAATACATGTTTTCATTGTGTGTAAAGCAGCATTGATGtggtaaaatactgtaaatgttaaataaatgaaactgca
>TU45987
tgcatgtgtgtgtgtatgtgtgtgtctgtgtgtgtgtgtgtaaatctgGCAGATCATGTCAACACCTGAGCACCAAATGAAAGCATTCAATCACAGTGAGATTGATTAAGAacggagacagacacagacagacaaccTTCAAAGATCTTGACAGAGACATTGTgcacaagaaaagaaaagaaaataaaagaaaaaagaagaaaaaaggaaacagcTGGTAGATGATACGTGCAGCAAACATCTGACTTCATGTGGACTTCATTCTGACTTCATCTATTCACCTGAAACAGGACTGCTTTTAAATCAGGCCTGCGATATTCATCCAGCCCATTTTCACGCGCCATGGCTGAACCTGCCTGGTGGAAGCTGACCTTCTCGAGGAAGAAGTCGTCTGAGTCCAAGGTCCTGTATGAAATCCCCGCAGAATATGGCAGCAACACTGGCAATAAAGAACTCTCCTACACAGATAGCACTGACAGCCAGCTAGATGCCAGGCTGGAGAAGATTGTGGACAAGTCTGCCAACAAAGGCCGTCACGTCAAAGTCTCGCACTCTGGCCGCTtcaaggagaagaagaagattcGAGCCACCCTTGCTGAAAATCCCAGTATGTTCCCAGAGTACAACAGGACTGATGAGAACCATGTGGTAGAGAAATAGAATCCACTCTACTAAACAAAAAGTGTCTTTCATCatcactcagacacacactccCGTCTGTTAATTAGCATGATGAAAGGAAAATACATGGGTTTAGAATGAAGATGAATATGTTGCTGcaaaacacacctgatccagccACAGGATCAGGAGAGTTCAAACTTGTACAAAGAAATGAAAGAGATTAATGAACAAAATCTCTTAATTTTATACGGGGTCTaatttaaaagctttgttttaaaaactctgtacgtctttatttaatttgaatatttaatTGGTCCAAGGTTTTGTTGCTCAGTCTACAAAGATACATACGAGCATTACTCCTCAAAACCcactttattttgtatatttagtattttttaggCTGGGTTCTTTTTAGGCTGGATTTTAGATGCTTACTGGTGTTTGTGCTTGTTAATACATGTTTTCATTGTGTGTAAAGCAGCATTGATGtggtaaaatactgtaaatgttaaataaatgaaactgcaTATTGGATGTTTTAGACATGACAATGACAATGACAAATACTGCTGCTATCAtgcaaattcttttttttttttacataatctgAACATTTTTATGATGACAGAGCaaaagcaatgctccaaaactaCTTGTATTAATTTCCCTTCAAAGTTTACCTGTCCTCCTGTAAAattgtaaagttgctattttgtagttttttgtgtgacagcagTGATATAATGTTCAGATGActgaatatactgaaatatgaaaaatgctTCTATTCTTAAATAAATTTGACAAGGT
>TU45988
aatctgGCAGATCATGTCAACACCTGAGCACCAAATGAAAGCATTCAATCACAGTGAGATTGATTAAGAacggagacagacacagacagacaaccTTCAAAGATCTTGACAGAGACATTGTgcacaagaaaagaaaagaaaataaaagaaaaaagaagaaaaaaggaaacagcTGGTAGATGATACGTGCAGCAAACATCTGACTTCATGTGGACTTCATTCTGACTTCATCTATTCACCTGAAACAGGACTGCTTTTAAATCAGGCCTGCGATATTCATCCAGCCCATTTTCACGCGCCATGGCTGAACCTGCCTGGTGGAAGCTGACCTTCTCGAGGAAGAAGTCGTCTGAGTCCAAGGTCCTGTATGAAATCCCCGCAGAATATGGCAGCAACACTGGCAATAAAGAACTCTCCTACACAGATAGCACTGACAGCCAGCTAGATGCCAGGCTGGAGAAGATTGTGGACAAGTCTGCCAACAAAGGCCGTCACGTCAAAGTCTCGCACTCTGGCCGCTtcaaggagaagaagaagattcGAGCCACCCTTGCTGAAAATCCCAGTATGTTCCCAGAGTACAACAGGACTGATGAGAACCATGTGGTAGAGAAATAGAATCCACTCTACTAAACAAAAAGTGTCTTTCATCatcactcagacacacactccCGTCTGTTAATTAGCATGATGAAAGGAAAATACATGGGTTTAGAATGAAGATGAATATGTTGCTGcaaaacacacctgatccagccACAGGATCAGGAGAGTTCAAACTTGTACAAAGAAATGAAAGAGATTAATGAACAAAATCTCTTAATTTTATACGGGGTCTaatttaaaagctttgttttaaaaactctgtacgtctttatttaatttgaatatttaatTGGTCCAAGGTTTTGTTGCTCAGTCTACAAAGATACATACGAGCATTACTCCTCAAAACCcactttattttgtatatttagtattttttaggCTGGGTTCTTTTTAGGCTGGATTTTAGATGCTTACTGGTGTTTGTGCTTGTTAATACATGTTTTCATTGTGTGTAAAGCAGCATTGATGtggtaaaatactgtaaatgttaaataaatgaaactgcaTATTGGATGTTTTAGACATGACAATGACAATGACAAATACTGCTGCTATCAtgcaaattcttttttttttttacataatctgAACATTTTTATGATGACAGAGCaaaagcaatgctccaaaactaCTTGTATTAATTTCCCTTCAAAGTTTACCTGTCCTCCTGTAAAattgtaaagttgctattttgtagttttttgtgtgacagcagTGATATAATGTTCAGATGActgaatatactgaaatatgaaaaatgctTCTATTCTTAAATAAATTTGACAAGGT
>TU45989
ATTTACTCAAGTTGCAAAGGGCTGTCCCTAATGTTCAGCTTGGACTGCAACTCTTGTGGGAGGCTGCATCAGCTAGATAggctgtgtgcatgtgtgtgtgtatgtgtgtgtctgtgtgtgtgtgtgtaaatctgGCAGATCATGTCAACACCTGAGCACCAAATGAAAGCATTCAATCACAGTGAGATTGATTAAGAacggagacagacacagacagacaaccTTCAAAGATCTTGACAGAGACATTGTgcacaagaaaagaaaagaaaataaaagaaaaaagaagaaaaaaggaaacagcTGGTAGATGATACGTGCAGCAAACATCTGACTTCATGTGGACTTCATTCTGACTTCATCTATTCACCTGAAACAGGACTGCTTTTAAATCAGGCCTGCGATATTCATCCAGCCCATTTTCACGCGCCATGGCTGAACCTGCCTGGTGGAAGCTGACCTTCTCGAGGAAGAAGTCGTCTGAGTCCAAGGTCCTGTATGAAATCCCCGCAGAATATGGCAGCAACACTGGCAATAAAGAACTCTCCTACACAGATAGCACTGACAGCCAGCTAGATGCCAGGCTGGAGAAGATTGTGGACAAGTCTGCCAACAAAGGCCGTCACGTCAAAGTCTCGCACTCTGGCCGCTtcaaggagaagaagaagattcGAGCCACCCTTGCTGAAAATCCCAGTATGTTCCCAGAGTACAACAGGACTGATGAGAACCATGTGGTAGAGAAATAGAATCCACTCTACTAAACAAAAAGTGTCTTTCATCatcactcagacacacactccCGTCTGTTAATTAGCATGATGAAAGGAAAATACATGGGTTTAGAATGAAGATGAATATGTTGCTGcaaaacacacctgatccagccACAGGATCAGGAGAGTTCAAACTTGTACAAAGAAATGAAAGAGATTAATGAACAAAATCTCTTAATTTTATACGGGGTCTaatttaaaagctttgttttaaaaactctgtacgtctttatttaatttgaatatttaatTGGTCCAAGGTTTTGTTGCTCAGTCTACAAAGATACATACGAGCATTACTCCTCAAAACCcactttattttgtatatttagtattttttaggCTGGGTTCTTTTTAGGCTGGATTTTAGATGCTTACTGGTGTTTGTGCTTGTTAATACATGTTTTCATTGTGTGTAAAGCAGCATTGATGtggtaaaatactgtaaatgttaaataaatgaaactgca
>XM_007259163.3
TGTTCAGCTTGGACTGCAACTCTTGTGGGAGGCTGCATCAGCTAGATAggctgtgtgcatgtgtgtgtgtatgtgtgtgtctgtgtgtgtgtgtgtaaatctgGCAGATCATGTCAACACCTGAGCACCAAATGAAAGCATTCAATCACAGTGAGATTGATTAAGAacggagacagacacagacagacaaccTTCAAAGATCTTGACAGAGACATTGTgcacaagaaaagaaaagaaaataaaagaaaaaagaagaaaaaaggaaacagcTGGTAGATGATACGTGCAGCAAACATCTGACTTCATGTGGACTTCATTCTGACTTCATCTATTCACCTGAAACAGGACTGCTTTTAAATCAGGCCTGCGATATTCATCCAGCCCATTTTCACGCGCCATGGCTGAACCTGCCTGGTGGAAGCTGACCTTCTCGAGGAAGAAGTCGTCTGAGTCCAAGGTCCTGTATGAAATCCCCGCAGAATATGGCAGCAACACTGGCAATAAAGAACTCTCCTACACAGATAGCACTGACAGCCAGCTAGATGCCAGGCTGGAGAAGATTGTGGACAAGTCTGCCAACAAAGGCCGTCACGTCAAAGTCTCGCACTCTGGCCGCTtcaaggagaagaagaagattcGAGCCACCCTTGCTGAAAATCCCAGTATGTTCCCAGAGTACAACAGGACTGATGAGAACCATGTGGTAGAGAAATAGAATCCACTCTACTAAACAAAAAGTGTCTTTCATCatcactcagacacacactccCGTCTGTTAATTAGCATGATGAAAGGAAAATACATGGGTTTAGAATGAAGATGAATATGTTGCTGcaaaacacacctgatccagccACAGGATCAGGAGAGTTCAAACTTGTACAAAGAAATGAAAGAGATTAATGAACAAAATCTCTTAATTTTATACGGGGTCTaatttaaaagctttgttttaaaaactctgtacgtctttatttaatttgaatatttaatTGGTCCAAGGTTTTGTTGCTCAGTCTACAAAGATACATACGAGCATTACTCCTCAAAACCcactttattttgtatatttagtattttttaggCTGGGTTCTTTTTAGGCTGGATTTTAGATGCTTACTGGTGTTTGTGCTTGTTAATACATGTTTTCATTGTGTGTAAAGCAGCATTGATGtggtaaaatactgtaaatgttaaataaatgaaactgca

Function

symbol description
prr15l Orthologous to human PRR15L (proline rich 15 like).

NR:

description
proline-rich protein 15-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45984 False 1115 TUCP 0.28 2 3783408 3789064
TU45985 True 1526 TUCP 0.39 2 3783125 3789192
TU45986 False 1157 TUCP 0.35 2 3783408 3789106
TU45987 False 1440 TUCP 0.38 2 3783125 3789106
TU45988 False 1398 TUCP 0.38 2 3783125 3789064
TU45989 False 1243 TUCP 0.39 2 3783408 3789192
XM_007259163.3 False 1212 mRNA 0.41 2 3783408 3789161

Neighbor

gene id symbol gene type direction distance location
mrpl10 NA coding downstream 6940 3770639 ~ 3776185 (-)
LOC103044690 osbpl7 coding downstream 12633 3749171 ~ 3770492 (-)
LOC103046317 LOC103046317,LOC108426453,LOC107565668,LOC107754097,LOC107677886,LOC108274275,LOC107743772 coding downstream 227906 3545433 ~ 3555219 (-)
myo1d myo1d,si:ch211-94l19.4,LOC107743773 coding downstream 250736 3403947 ~ 3532389 (-)
LOC103047433 psmd11,LOC108426450,LOC107743775,LOC107568948,LOC107691212,LOC103367354 coding downstream 392547 3382775 ~ 3390578 (-)
LOC103042441 LOC108426417,LOC107677865,LOC108273677 coding upstream 13720 3802912 ~ 3807018 (-)
cbx1 cbx1,cbx1b,LOC107677876 coding upstream 34726 3823918 ~ 3829363 (-)
ccdc189 NA coding upstream 47431 3836623 ~ 3839557 (-)
LOC103039858 LOC108426464 coding upstream 72382 3861574 ~ 3870176 (-)
LOC103038619 NA coding upstream 94822 3884014 ~ 3893365 (-)
G34166 pnpo non-coding downstream 1384 3777900 ~ 3781741 (-)
G34159 NA non-coding downstream 54165 3728642 ~ 3728960 (-)
G34101 NA non-coding downstream 384012 3391629 ~ 3399113 (-)
LOC111192350 NA non-coding downstream 593689 3107202 ~ 3189436 (-)
G34036 NA non-coding downstream 697719 3060369 ~ 3085406 (-)
G34218 rnf40,LOC108273672,LOC107743762,LOC107677883,LOC107563784,LOC107565773 non-coding upstream 50811 3840003 ~ 3842727 (-)
LOC103038927 NA non-coding upstream 91390 3880582 ~ 3883412 (-)
G34230 NA non-coding upstream 114142 3903334 ~ 3903569 (-)
G34232 NA non-coding upstream 121097 3910289 ~ 3910512 (-)
G34238 NA non-coding upstream 135250 3924442 ~ 3924669 (-)
G34046 NA other downstream 588748 3181168 ~ 3194377 (-)
G33904 NA other downstream 1473796 2303262 ~ 2309329 (-)
G33836 LOC103393566,LOC105888730 other downstream 1587030 2194757 ~ 2196095 (-)
G33823 srcap other downstream 1606066 2169023 ~ 2177059 (-)
LOC103022010 rgs9b,LOC108444257,LOC107660859,LOC107734240,LOC107584086,LOC107709642,LOC107692097,LOC108273767,LOC105888735 other downstream 1740822 2022071 ~ 2042303 (-)
G34214 NA other upstream 47429 3836621 ~ 3883469 (-)
psme4 psme4,psme4b,LOC108426507,LOC107584369,LOC107749369 other upstream 1182506 4971698 ~ 4995913 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107566231,LOC106949585 other upstream 1466427 5255619 ~ 5362486 (-)
ccdc186 ccdc186,LOC107755417,LOC107689962 other upstream 2114396 5903588 ~ 5928154 (-)
G34770 NA other upstream 2146643 5935835 ~ 5939400 (-)

Expression


Co-expression Network