G34214


Basic Information

Item Value
gene id G34214
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 3836621 ~ 3883469 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU46045
GGAAGCTCATAGGGGATATTTGATACTCGTGAGTAGACCGTAACTACTGGGAATCTTCACACATCCCCACTTATCAGGTATCATATAAATACCCATGTGGTAGAGATAGCTCTCAAACACTTCCTAGCAAAGCTGTCTGGATTGAGGAGctgtttagccAGAATTCAATTCTCCTCCACTCCTTTTTACTGCAAAATGGGGCGCTATATGCTGATCCTGGCTGTGACTGTAACTCTCGTCTTAGTTGCCCAGGCCCTGAAATGTAAACACTGCTCGGACATTCAAAAGATGCCGCCTTACTGTGAAAAAACAGAGGAACGAGAATGCAGTATTGGCTCCAATAAGTGCATTACCATCGACTTTGCAAAACCAGCATATGGTCAAGTGCGCAGATGTGCCACTCACAGAGAATGTGAAGATAAAGTGCCTAGCCAGGTGCAGATACACTGCTGTGACGAAGACCTCTGCAACTGACCTTCCTATACTTATAGAGAGAAGAGGGGAGCAAGTCCACTTTAAATAAAGCCAAACTATCTCtagcattatttataattaatttaacaaaTGAATAGCTGCCAAAATGTAGCCCTCACTAAATGTGTTCACTAAAAATTCAttattaaatgaaacaaaataaataacatgcATGCAAAAGAAtaaaaaaaaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46045 True 675 TUCP 0.40 5 3836621 3883469

Neighbor

gene id symbol gene type direction distance location
cbx1 cbx1,cbx1b,LOC107677876 coding downstream 7258 3823918 ~ 3829363 (-)
LOC103042441 LOC108426417,LOC107677865,LOC108273677 coding downstream 29603 3802912 ~ 3807018 (-)
mrpl10 NA coding downstream 60436 3770639 ~ 3776185 (-)
LOC103044690 osbpl7 coding downstream 66129 3749171 ~ 3770492 (-)
LOC103046317 LOC103046317,LOC108426453,LOC107565668,LOC107754097,LOC107677886,LOC108274275,LOC107743772 coding downstream 281402 3545433 ~ 3555219 (-)
LOC103038619 NA coding upstream 545 3884014 ~ 3893365 (-)
LOC103036928 NA coding upstream 204634 4088103 ~ 4097955 (-)
LOC103021465 LOC108426423,LOC108273974,LOC107754115 coding upstream 264719 4148188 ~ 4161856 (-)
LOC103044368 LOC108426474 coding upstream 335998 4219467 ~ 4440792 (-)
atrnl1 atrnl1,atrnl1b,LOC107755548,LOC107689951,LOC107708169 coding upstream 708565 4592034 ~ 4703993 (-)
G34166 pnpo non-coding downstream 54880 3777900 ~ 3781741 (-)
G34159 NA non-coding downstream 107661 3728642 ~ 3728960 (-)
G34101 NA non-coding downstream 437508 3391629 ~ 3399113 (-)
LOC111192350 NA non-coding downstream 647185 3107202 ~ 3189436 (-)
G34036 NA non-coding downstream 751215 3060369 ~ 3085406 (-)
G34230 NA non-coding upstream 19865 3903334 ~ 3903569 (-)
G34232 NA non-coding upstream 26820 3910289 ~ 3910512 (-)
G34238 NA non-coding upstream 40973 3924442 ~ 3924669 (-)
G34240 NA non-coding upstream 42012 3925481 ~ 3925690 (-)
G34265 LOC108426470 non-coding upstream 119455 4002924 ~ 4003802 (-)
prr15l prr15l other downstream 47429 3783125 ~ 3789192 (-)
G34046 NA other downstream 642244 3181168 ~ 3194377 (-)
G33904 NA other downstream 1527292 2303262 ~ 2309329 (-)
G33836 LOC103393566,LOC105888730 other downstream 1640526 2194757 ~ 2196095 (-)
G33823 srcap other downstream 1659562 2169023 ~ 2177059 (-)
psme4 psme4,psme4b,LOC108426507,LOC107584369,LOC107749369 other upstream 1088229 4971698 ~ 4995913 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107566231,LOC106949585 other upstream 1372150 5255619 ~ 5362486 (-)
ccdc186 ccdc186,LOC107755417,LOC107689962 other upstream 2020119 5903588 ~ 5928154 (-)
G34770 NA other upstream 2052366 5935835 ~ 5939400 (-)
ablim1 ablim1 other upstream 2165532 6049001 ~ 6147311 (-)

Expression


Co-expression Network