G34238


Basic Information

Item Value
gene id G34238
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 3924442 ~ 3924669 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU46077
GCCCAAGTTCCCTAATGGTGCAACAAGCTACCTTCCACTGCCAGAGCAGGAGCTTCCCTCCctacctttaagaaactcctgaagactgagctcttcaaagagctcttactctccttaCACCtataacaaactaactacttctaacctcctttcctcctcttttCAACTTTTACCCTTTGGCCTCAAACCCCAAAAATTTGTTTGCCTTGTACGTATATGTTATCTATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46077 True 228 lncRNA 0.35 1 3924442 3924669

Neighbor

gene id symbol gene type direction distance location
LOC103038619 NA coding downstream 31077 3884014 ~ 3893365 (-)
LOC103039858 LOC108426464 coding downstream 54266 3861574 ~ 3870176 (-)
ccdc189 NA coding downstream 84885 3836623 ~ 3839557 (-)
cbx1 cbx1,cbx1b,LOC107677876 coding downstream 95079 3823918 ~ 3829363 (-)
LOC103042441 LOC108426417,LOC107677865,LOC108273677 coding downstream 117424 3802912 ~ 3807018 (-)
LOC103036928 NA coding upstream 163434 4088103 ~ 4097955 (-)
LOC103021465 LOC108426423,LOC108273974,LOC107754115 coding upstream 223519 4148188 ~ 4161856 (-)
LOC103044368 LOC108426474 coding upstream 294798 4219467 ~ 4440792 (-)
atrnl1 atrnl1,atrnl1b,LOC107755548,LOC107689951,LOC107708169 coding upstream 667365 4592034 ~ 4703993 (-)
LOC103022618 cyth1,cyth1b,LOC103022618,LOC108274176,LOC108426518,LOC104925066,LOC107755486,LOC107690912,LOC107684080,LOC107581598 coding upstream 786431 4711100 ~ 4791734 (-)
G34232 NA non-coding downstream 13930 3910289 ~ 3910512 (-)
G34230 NA non-coding downstream 20873 3903334 ~ 3903569 (-)
LOC103038927 NA non-coding downstream 41030 3880582 ~ 3883412 (-)
G34218 rnf40,LOC108273672,LOC107743762,LOC107677883,LOC107563784,LOC107565773 non-coding downstream 81715 3840003 ~ 3842727 (-)
G34166 pnpo non-coding downstream 142701 3777900 ~ 3781741 (-)
G34240 NA non-coding upstream 812 3925481 ~ 3925690 (-)
G34265 LOC108426470 non-coding upstream 78255 4002924 ~ 4003802 (-)
G34298 bms1,LOC106605356,LOC107566656,LOC103354837,LOC108228954 non-coding upstream 187712 4112381 ~ 4124821 (-)
G34300 NA non-coding upstream 208617 4133286 ~ 4135287 (-)
G34311 NA non-coding upstream 246384 4171053 ~ 4177653 (-)
G34214 NA other downstream 40973 3836621 ~ 3883469 (-)
prr15l prr15l other downstream 135250 3783125 ~ 3789192 (-)
G34046 NA other downstream 730065 3181168 ~ 3194377 (-)
G33904 NA other downstream 1615113 2303262 ~ 2309329 (-)
G33836 LOC103393566,LOC105888730 other downstream 1728347 2194757 ~ 2196095 (-)
psme4 psme4,psme4b,LOC108426507,LOC107584369,LOC107749369 other upstream 1047029 4971698 ~ 4995913 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107566231,LOC106949585 other upstream 1330950 5255619 ~ 5362486 (-)
ccdc186 ccdc186,LOC107755417,LOC107689962 other upstream 1978919 5903588 ~ 5928154 (-)
G34770 NA other upstream 2011166 5935835 ~ 5939400 (-)
ablim1 ablim1 other upstream 2124332 6049001 ~ 6147311 (-)

Expression


Co-expression Network