G34532


Basic Information

Item Value
gene id G34532
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 5107810 ~ 5125290 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU46440
CTTGTACTTCTGGTGAAGAGGTTTGTTTTGTACTACTCCAATGGCCACCATTGAGACGATTCCAATGACAAAAAGGACAGTGATGAAGATTATTCTGGGCCGGTGCCAGGGATTCTTGGCTTTCATTTCTGGCTGATCATCCATTTGTGCAGCTTTCTTTATTCCGTTCTTGTTCTCTCCACTCTTTCAGACGCTCTTTCTGGGTCTCCTTCTGTTTGGTGTTCTTGTTGGTTGGCTTGTATTTCCCAGCCAGCAGGTCTTTCCCATTCTTGAGGTCCTTTATAAGGCAGTGGTGGGGGGTGCGGGGGCTTTGAGTGTGAGTGGGCGGGATTCCCGCCagcttttcccctctctctttctctctatctctctctctctctttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46440 True 383 lncRNA 0.40 2 5107810 5125290

Neighbor

gene id symbol gene type direction distance location
LOC103044692 LOC108426432 coding upstream 8107 5087009 ~ 5099703 (+)
LOC103029028 LOC108426433,LOC107581628 coding upstream 29898 5070053 ~ 5077912 (+)
thbs2 thbs2b,LOC108426506,LOC108274281,LOC107755534,LOC107702453,LOC107566173,LOC107581559,LOC107707836 coding upstream 54305 5030807 ~ 5053505 (+)
chac2 chac2,LOC107749368,LOC107686371 coding upstream 136475 4967574 ~ 4971335 (+)
llgl2 llgl2,LOC107690902,LOC107684069,LOC107755492,LOC107722216 coding upstream 141380 4943870 ~ 4966430 (+)
aldh18a1 aldh18a1,LOC107755531 coding downstream 22050 5147340 ~ 5158697 (+)
zdhhc6 zdhhc6,LOC107684040,LOC107722226,LOC107755527,LOC107702458 coding downstream 448175 5573465 ~ 5579442 (+)
LOC103039360 LOC108426428 coding downstream 470791 5596081 ~ 5607391 (+)
gpam gpam,LOC107702461,LOC107755524,LOC107566297,LOC107581571,LOC107722223 coding downstream 490405 5615695 ~ 5641795 (+)
LOC103038312 NA coding downstream 517027 5642317 ~ 5653677 (+)
G34500 NA non-coding upstream 51458 5054363 ~ 5056352 (+)
G34489 NA non-coding upstream 128398 4978747 ~ 4979412 (+)
G34485 NA non-coding upstream 134723 4971785 ~ 4973087 (+)
G34409 mfsd13a,LOC107755491,LOC107565800,LOC107690908 non-coding upstream 232256 4875138 ~ 4875554 (+)
G34410 mfsd13a non-coding upstream 236390 4870364 ~ 4871420 (+)
G34534 NA non-coding downstream 10109 5135399 ~ 5135654 (+)
G34535 NA non-coding downstream 17691 5142981 ~ 5143335 (+)
G34536 NA non-coding downstream 18458 5143748 ~ 5144056 (+)
G34537 NA non-coding downstream 19132 5144422 ~ 5144636 (+)
G34538 NA non-coding downstream 19516 5144806 ~ 5145185 (+)
LOC103025551 sema4g other upstream 183044 4882556 ~ 4924766 (+)
G34309 NA other upstream 929727 4171051 ~ 4178083 (+)
tbkbp1 tbkbp1,LOC107565677,LOC107754096,LOC107677885,LOC107743771 other upstream 1448678 3564030 ~ 3659132 (+)
amz2 amz2 other upstream 3050847 2050742 ~ 2056963 (+)
LOC111192342 dnah9 other upstream 3719791 1369173 ~ 1388019 (+)
dnmbp dnmbp,LOC107722208,LOC107684043 other downstream 567232 5692522 ~ 5756116 (+)
LOC103045604 LOC108426437,LOC107683136 other downstream 1121356 6246646 ~ 6258050 (+)
slc38a10 slc38a10,LOC102792191,LOC107749860 other downstream 1376855 6502145 ~ 6541460 (+)
LOC103029551 qki2,LOC103029551,LOC108426533,LOC107684089,LOC108274051,LOC107749853,LOC107755469 other downstream 1467317 6592607 ~ 6663607 (+)
G34931 NA other downstream 1605664 6730954 ~ 6731424 (+)

Expression


Co-expression Network