G34534


Basic Information

Item Value
gene id G34534
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 5135399 ~ 5135654 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU46448
caaaaagaacacttggagaagcCAAGATGTCCGAAagaacatttggagatgcccaaaatgacacttggaggtTCCCAAAAGGACTcttagagatgcccaaaaggacacttggagatgccaaaaaggacacttggagatgtctgaaagaacatttggagatgcccaaaatgacacttggaggttcccaaaaggacacttggagatgcccgaaaggacacttggagacgtTCAAAAGGActcttggagatgccaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46448 True 256 lncRNA 0.50 1 5135399 5135654

Neighbor

gene id symbol gene type direction distance location
LOC103044692 LOC108426432 coding upstream 35696 5087009 ~ 5099703 (+)
LOC103029028 LOC108426433,LOC107581628 coding upstream 57487 5070053 ~ 5077912 (+)
thbs2 thbs2b,LOC108426506,LOC108274281,LOC107755534,LOC107702453,LOC107566173,LOC107581559,LOC107707836 coding upstream 81894 5030807 ~ 5053505 (+)
chac2 chac2,LOC107749368,LOC107686371 coding upstream 164064 4967574 ~ 4971335 (+)
llgl2 llgl2,LOC107690902,LOC107684069,LOC107755492,LOC107722216 coding upstream 168969 4943870 ~ 4966430 (+)
aldh18a1 aldh18a1,LOC107755531 coding downstream 11686 5147340 ~ 5158697 (+)
zdhhc6 zdhhc6,LOC107684040,LOC107722226,LOC107755527,LOC107702458 coding downstream 437811 5573465 ~ 5579442 (+)
LOC103039360 LOC108426428 coding downstream 460427 5596081 ~ 5607391 (+)
gpam gpam,LOC107702461,LOC107755524,LOC107566297,LOC107581571,LOC107722223 coding downstream 480041 5615695 ~ 5641795 (+)
LOC103038312 NA coding downstream 506663 5642317 ~ 5653677 (+)
G34532 NA non-coding upstream 10109 5107810 ~ 5125290 (+)
G34500 NA non-coding upstream 79047 5054363 ~ 5056352 (+)
G34489 NA non-coding upstream 155987 4978747 ~ 4979412 (+)
G34485 NA non-coding upstream 162312 4971785 ~ 4973087 (+)
G34409 mfsd13a,LOC107755491,LOC107565800,LOC107690908 non-coding upstream 259845 4875138 ~ 4875554 (+)
G34535 NA non-coding downstream 7327 5142981 ~ 5143335 (+)
G34536 NA non-coding downstream 8094 5143748 ~ 5144056 (+)
G34537 NA non-coding downstream 8768 5144422 ~ 5144636 (+)
G34538 NA non-coding downstream 9152 5144806 ~ 5145185 (+)
G34539 NA non-coding downstream 10422 5146076 ~ 5146587 (+)
LOC103025551 sema4g other upstream 210633 4882556 ~ 4924766 (+)
G34309 NA other upstream 957316 4171051 ~ 4178083 (+)
tbkbp1 tbkbp1,LOC107565677,LOC107754096,LOC107677885,LOC107743771 other upstream 1476267 3564030 ~ 3659132 (+)
amz2 amz2 other upstream 3078436 2050742 ~ 2056963 (+)
LOC111192342 dnah9 other upstream 3747380 1369173 ~ 1388019 (+)
dnmbp dnmbp,LOC107722208,LOC107684043 other downstream 556868 5692522 ~ 5756116 (+)
LOC103045604 LOC108426437,LOC107683136 other downstream 1110992 6246646 ~ 6258050 (+)
slc38a10 slc38a10,LOC102792191,LOC107749860 other downstream 1366491 6502145 ~ 6541460 (+)
LOC103029551 qki2,LOC103029551,LOC108426533,LOC107684089,LOC108274051,LOC107749853,LOC107755469 other downstream 1456953 6592607 ~ 6663607 (+)
G34931 NA other downstream 1595300 6730954 ~ 6731424 (+)

Expression


Co-expression Network