G34605


Basic Information

Item Value
gene id G34605
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 5658969 ~ 5659199 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU46543
CTGCTAATAAGCAATTAACTACAAAAGACCAGAATGGTAACAACACTAGGTACCAGTGCCATTCTCTATATAACCATATCTTTCTGTCTAGTGCATTTCCTTAAGCTATTATATAATACACATTTGTTTCAGTTCCCACTGACATTTGTCCTTCTCACATTTCTTAACAATCACTTCCTTTCTATGATTCTCTGCTAGTGATCAGAAAATGTGACAGTTCTATGAACTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46543 True 231 lncRNA 0.35 1 5658969 5659199

Neighbor

gene id symbol gene type direction distance location
LOC103038312 NA coding upstream 5292 5642317 ~ 5653677 (+)
gpam gpam,LOC107702461,LOC107755524,LOC107566297,LOC107581571,LOC107722223 coding upstream 17174 5615695 ~ 5641795 (+)
LOC103039360 LOC108426428 coding upstream 51578 5596081 ~ 5607391 (+)
zdhhc6 zdhhc6,LOC107684040,LOC107722226,LOC107755527,LOC107702458 coding upstream 79527 5573465 ~ 5579442 (+)
aldh18a1 aldh18a1,LOC107755531 coding upstream 500272 5147340 ~ 5158697 (+)
cpn1 cpn1,LOC107722209,LOC107684044,LOC107702463 coding downstream 9868 5669067 ~ 5684163 (+)
LOC107197899 NA coding downstream 98873 5758072 ~ 5764882 (+)
LOC103045303 NA coding downstream 106657 5765856 ~ 5771877 (+)
casp7 casp7 coding downstream 147963 5807162 ~ 5819997 (+)
LOC107197901 NA coding downstream 165189 5824388 ~ 5828009 (+)
G34587 vti1a,LOC107566351,LOC107702459 non-coding upstream 87288 5400955 ~ 5571681 (+)
G34580 NA non-coding upstream 272791 5385883 ~ 5386178 (+)
LOC111192354 NA non-coding upstream 359948 5209468 ~ 5299021 (+)
G34552 crygmxl2,LOC103030716,LOC108426411,LOC107581669,LOC107702435 non-coding upstream 493362 5164666 ~ 5165607 (+)
G34539 NA non-coding upstream 512382 5146076 ~ 5146587 (+)
G34606 NA non-coding downstream 67 5659266 ~ 5659902 (+)
G34615 NA non-coding downstream 80415 5739614 ~ 5742444 (+)
G34602 NA non-coding downstream 129559 5788758 ~ 5793818 (+)
G34636 dclre1a non-coding downstream 185703 5844902 ~ 5847925 (+)
G34644 ccdc186,LOC107755417,LOC107566113 non-coding downstream 255042 5914241 ~ 5916402 (+)
LOC103025551 sema4g other upstream 734203 4882556 ~ 4924766 (+)
G34309 NA other upstream 1480886 4171051 ~ 4178083 (+)
tbkbp1 tbkbp1,LOC107565677,LOC107754096,LOC107677885,LOC107743771 other upstream 1999837 3564030 ~ 3659132 (+)
amz2 amz2 other upstream 3602006 2050742 ~ 2056963 (+)
LOC111192342 dnah9 other upstream 4270950 1369173 ~ 1388019 (+)
dnmbp dnmbp,LOC107722208,LOC107684043 other downstream 33323 5692522 ~ 5756116 (+)
LOC103045604 LOC108426437,LOC107683136 other downstream 587447 6246646 ~ 6258050 (+)
slc38a10 slc38a10,LOC102792191,LOC107749860 other downstream 842946 6502145 ~ 6541460 (+)
LOC103029551 qki2,LOC103029551,LOC108426533,LOC107684089,LOC108274051,LOC107749853,LOC107755469 other downstream 933408 6592607 ~ 6663607 (+)
G34931 NA other downstream 1071755 6730954 ~ 6731424 (+)

Expression


Co-expression Network