G34682


Basic Information

Item Value
gene id G34682
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 5391095 ~ 5391320 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU46666
ATTATAAACAGATTCTACTTTTAAAGGAATAGTCCAACATTTTTCCAGCACCTGTCAGACATTCAGAACTCCcatttcattcagtgttttttctttctttctttttttattgagaaatattattaataatattaatattcaagaCATCAAATATGAATGGAAACATTGAATTAAGTAGCGTAGTTGCCTCAAAATGTAttcaacaaaccagaatatcttTTGTACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46666 True 226 lncRNA 0.39 1 5391095 5391320

Neighbor

gene id symbol gene type direction distance location
LOC103030716 crygmxl2,LOC103030716,LOC108426411,LOC106516994,LOC104933141,LOC103368160,LOC107581669,LOC107702435 coding downstream 225470 5163950 ~ 5165625 (-)
LOC103029658 crygmx,LOC103029658,LOC108426431,LOC107684144,LOC107566847,LOC107755411,LOC107581668 coding downstream 227629 5160908 ~ 5163466 (-)
entpd1 NA coding downstream 265897 5099968 ~ 5125198 (-)
mrpl43 mrpl43,LOC107722220,LOC107581592,LOC107565786 coding downstream 460388 4927516 ~ 4930707 (-)
mfsd13a mfsd13a,LOC107565800,LOC107581593,LOC107684076,LOC107690908,LOC107755491 coding downstream 512336 4870049 ~ 4878759 (-)
vti1a vti1a,LOC107566351,LOC107702459 coding upstream 9608 5400928 ~ 5571634 (-)
acsl5 acsl5,LOC107702457,LOC107755526,LOC107566323,LOC107581566,LOC107722228,LOC107684041 coding upstream 188010 5579330 ~ 5596438 (-)
tectb tectb,LOC107755437,LOC107566341,LOC107702437,LOC107722201 coding upstream 209048 5600368 ~ 5687159 (-)
nrap nrap,LOC107755535 coding upstream 380299 5771619 ~ 5803122 (-)
LOC103041412 LOC103041412,LOC108426492 coding upstream 427402 5818722 ~ 5822431 (-)
G34556 NA non-coding downstream 197236 5191033 ~ 5193859 (-)
G34543 aldh18a1,LOC107707764 non-coding downstream 238682 5151372 ~ 5152413 (-)
G34544 aldh18a1,LOC107684039 non-coding downstream 240132 5150310 ~ 5150963 (-)
G34542 NA non-coding downstream 247039 5143724 ~ 5144056 (-)
G34541 NA non-coding downstream 247760 5143072 ~ 5143335 (-)
G34688 zdhhc6,LOC107684040,LOC107722226,LOC107581631 non-coding upstream 182153 5573473 ~ 5574758 (-)
G34708 NA non-coding upstream 253586 5644906 ~ 5645105 (-)
G34713 NA non-coding upstream 267704 5659024 ~ 5659904 (-)
G34719 cpn1,LOC107722209,LOC107684044 non-coding upstream 286098 5677418 ~ 5681939 (-)
G34760 nhlrc2 non-coding upstream 471137 5862457 ~ 5867932 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107566231,LOC106949585 other downstream 28609 5255619 ~ 5362486 (-)
psme4 psme4,psme4b,LOC108426507,LOC107584369,LOC107749369 other downstream 395182 4971698 ~ 4995913 (-)
G34214 NA other downstream 1507626 3836621 ~ 3883469 (-)
prr15l prr15l other downstream 1601903 3783125 ~ 3789192 (-)
G34046 NA other downstream 2196718 3181168 ~ 3194377 (-)
ccdc186 ccdc186,LOC107755417,LOC107689962 other upstream 512268 5903588 ~ 5928154 (-)
G34770 NA other upstream 544515 5935835 ~ 5939400 (-)
ablim1 ablim1 other upstream 657681 6049001 ~ 6147311 (-)
LOC103026268 bahcc1 other upstream 975364 6366684 ~ 6513701 (-)
G34953 NA other upstream 1145701 6537021 ~ 6541364 (-)

Expression


Co-expression Network