G34769


Basic Information

Item Value
gene id G34769
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 5927689 ~ 6012669 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU46774
ctgctgaatctgactcccgcttcgcggacagaatcggcacaacacccccgctgtagaactgcggtagtgaaaacagcgcttataaataaattagtttagtttcactttcagttttcgttattttttttttaaataaaaatataattaaaaaacagacgcctacatctcggactattttctggagcccgggtcggatttacgggcgggcctcgggtcatgtcgggttcgggcagagaatctaagctctagagagcttggactccggagagcaatctccagctaACGTAAGAGAACGGTATATCGTACACTTCAGTATTCCGTACAGTTgagcatttaaacaataaaatacttaataataaactattgttATATTTGAAATAATGTCTGGGGTCATTGTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46774 True 400 lncRNA 0.38 2 5927689 6012669

Neighbor

gene id symbol gene type direction distance location
dclre1a NA coding downstream 74881 5842978 ~ 5852808 (-)
LOC103041412 LOC103041412,LOC108426492 coding downstream 105258 5818722 ~ 5822431 (-)
nrap nrap,LOC107755535 coding downstream 124567 5771619 ~ 5803122 (-)
tectb tectb,LOC107755437,LOC107566341,LOC107702437,LOC107722201 coding downstream 240530 5600368 ~ 5687159 (-)
acsl5 acsl5,LOC107702457,LOC107755526,LOC107566323,LOC107581566,LOC107722228,LOC107684041 coding downstream 331251 5579330 ~ 5596438 (-)
pgs1 pgs1,LOC107690911,LOC107755482,LOC107722233,LOC107601408 coding upstream 141025 6153694 ~ 6178101 (-)
tmem235 tmem235 coding upstream 243735 6256404 ~ 6266677 (-)
birc5 birc5,birc5a,LOC107684154,LOC107581679,LOC107722191,LOC108273465 coding upstream 255732 6268401 ~ 6270943 (-)
LOC103025956 fscn2,LOC107684083,LOC107722237,LOC107581600 coding upstream 261202 6273871 ~ 6287633 (-)
LOC103027554 NA coding upstream 540664 6553333 ~ 6558835 (-)
G34765 adrb1 non-coding downstream 35698 5887038 ~ 5891991 (-)
G34760 nhlrc2 non-coding downstream 59757 5862457 ~ 5867932 (-)
G34719 cpn1,LOC107722209,LOC107684044 non-coding downstream 245750 5677418 ~ 5681939 (-)
G34713 NA non-coding downstream 267785 5659024 ~ 5659904 (-)
G34708 NA non-coding downstream 282584 5644906 ~ 5645105 (-)
G34791 NA non-coding upstream 30256 6042925 ~ 6043439 (-)
G34829 trub1,LOC107755443,LOC107702428 non-coding upstream 136561 6149230 ~ 6152861 (-)
G34939 NA non-coding upstream 347242 6359911 ~ 6360378 (-)
G34987 timm23a,timm23,LOC103030206,LOC108426535,LOC107690962,LOC107561858,LOC107684090 non-coding upstream 662910 6675579 ~ 6679954 (-)
G34988 NA non-coding upstream 667682 6680351 ~ 6680909 (-)
tcf7l2 tcf7l2,LOC107755529,LOC107566231,LOC106949585 other downstream 565203 5255619 ~ 5362486 (-)
psme4 psme4,psme4b,LOC108426507,LOC107584369,LOC107749369 other downstream 931776 4971698 ~ 4995913 (-)
G34214 NA other downstream 2044220 3836621 ~ 3883469 (-)
prr15l prr15l other downstream 2138497 3783125 ~ 3789192 (-)
G34046 NA other downstream 2733312 3181168 ~ 3194377 (-)
ablim1 ablim1 other upstream 36332 6049001 ~ 6147311 (-)
LOC103026268 bahcc1 other upstream 354015 6366684 ~ 6513701 (-)
G34953 NA other upstream 524352 6537021 ~ 6541364 (-)
ndufaf8 NA other upstream 530475 6543144 ~ 6546582 (-)
G34981 qki2,LOC103029551,LOC108426533 other upstream 607011 6619680 ~ 6653585 (-)

Expression


Co-expression Network