G34903


Basic Information

Item Value
gene id G34903
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 6663657 ~ 6663983 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU46988
GCTGGGAAATTTAGTTTGTCCTTTTGAGTTTCAGTGTTGCTTGAGTTCTGTGCCTTTTCATGTAAAGTGTGAGCTATTAaccattttactttatataattGGATTAATATTTTCTTGTCTACTGtactaacatttaaatatatctttACATTAACACTTTCAATAATTTTTGTCTGCtttgaatctttaaaaaaaggtgtgtgaAATTAAGCAAAAGAGTGTTGAACTGACAAATTTAAGGATGCTGGACTAAACTCTGTACTGAAAAGCAATAGCAGaatattaaaatcatagttttaAAAGAAACTAACTTTGTCGCTCTTTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46988 True 327 lncRNA 0.43 1 6663657 6663983

Neighbor

gene id symbol gene type direction distance location
prph2 prph2,prph2a,LOC107601435,LOC107581607,LOC107684088 coding upstream 75037 6583214 ~ 6588620 (+)
tbcc NA coding upstream 82398 6579898 ~ 6581259 (+)
LOC103028092 LOC108273792 coding upstream 96551 6560860 ~ 6567106 (+)
tepsin tepsin,LOC105892758 coding upstream 110439 6547550 ~ 6553218 (+)
LOC103024806 LOC108426520,LOC108274104,LOC107601442,LOC107755481,LOC107581599,LOC107690914,LOC107684082,LOC107722230 coding upstream 478418 6180824 ~ 6185239 (+)
LOC103030206 timm23a,timm23,LOC103030206,LOC108426535,LOC107690962,LOC107561858,LOC107684090 coding downstream 11559 6675542 ~ 6680021 (+)
LOC103031150 LOC108426536 coding downstream 34656 6698639 ~ 6704998 (+)
LOC103046215 si:ch73-127m5.1,LOC108410513,LOC108273477,LOC107690930,LOC107755465,LOC107749846,LOC107684096,LOC105892755 coding downstream 69328 6733311 ~ 6776528 (+)
LOC103031986 ndst2b,LOC108410510,LOC108273828,LOC107755463,LOC107684097,LOC107749844 coding downstream 114219 6778202 ~ 6877033 (+)
LOC103033683 LOC108410508 coding downstream 357864 7021847 ~ 7028159 (+)
LOC107197904 NA non-coding upstream 175229 6483624 ~ 6488428 (+)
LOC111192360 NA non-coding upstream 290907 6371928 ~ 6372750 (+)
G34873 bahcc1,LOC107722173,LOC107581601,LOC107684084 non-coding upstream 292899 6370527 ~ 6370758 (+)
G34880 NA non-coding upstream 294376 6366684 ~ 6369281 (+)
LOC111192400 NA non-coding upstream 341364 6312621 ~ 6322293 (+)
G34916 NA non-coding downstream 5779 6669762 ~ 6669991 (+)
G34923 NA non-coding downstream 25809 6689792 ~ 6690139 (+)
G34930 NA non-coding downstream 54807 6718790 ~ 6719186 (+)
G35012 NA non-coding downstream 145245 6809228 ~ 6942271 (+)
G35016 LOC108410509 non-coding downstream 216500 6880483 ~ 6891804 (+)
LOC103029551 qki2,LOC103029551,LOC108426533,LOC107684089,LOC108274051,LOC107749853,LOC107755469 other upstream 50 6592607 ~ 6663607 (+)
slc38a10 slc38a10,LOC102792191,LOC107749860 other upstream 122197 6502145 ~ 6541460 (+)
LOC103045604 LOC108426437,LOC107683136 other upstream 405607 6246646 ~ 6258050 (+)
dnmbp dnmbp,LOC107722208,LOC107684043 other upstream 907541 5692522 ~ 5756116 (+)
LOC103025551 sema4g other upstream 1738891 4882556 ~ 4924766 (+)
G34931 NA other downstream 66971 6730954 ~ 6731424 (+)
G35021 NA other downstream 238434 6902417 ~ 6903997 (+)
fasn fasn other downstream 1722190 8386173 ~ 8438865 (+)
LOC103037241 wac,waca,LOC107738973,LOC107665881,LOC107749376 other downstream 1778149 8442132 ~ 8472989 (+)
LOC103024481 adamts14,LOC103367006 other downstream 2055371 8719354 ~ 8851392 (+)

Expression


Co-expression Network