ndufaf8


Basic Information

Item Value
gene id ndufaf8
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 6543144 ~ 6546582 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU47047
GGCGGGCCGTTTCTTCGTCACTAACATGGTGAGCACGGGGAGTTAGCCTGCCTGTGAGCTAATGTTAATAACTCTGGGCTGTGCTGAGACTTAAAGCTGATCAGAATCATGTCAGGGACAAACCCCTGGACCCGGAGCCGAGAGAGGATGAGGCGGTTCCCCGACCTGCTGGCCCAGTGCTCCACAGAGGCAGCAGTTTATGGGAAATGTGTGGTCTCCACTACTACTGGTAAACAGGAGCTGAAGAAAGATTTATGTGTAAAAGAGTTTGAAGCCCTGAAGACCTGCTTTGTCTCTGCTGCAAAACGGGGTGTGAAGTAGATGGAGTGCACAAAGCCATTCATTGACCATCATGTtttataaacatacatttatttgtatagttacaatataaaaaacagttgCTGCCATTTTTATTTACCAGTATACATAgtgacattatttttaatatttgaataatatatGTTGGTTCAGCATATATTTGTATTGTCCTCGtgtataaaacataaatgaatTGTATGACACTTGGTTTTGTGTGAGCATGAGTAATA
>XM_015608363.2
AATCAGCAAAGATAGTCAATTTTAGGGGGCGGGTCATACAGATGGTTGACCAATCACTGGTGTGAGAGGGCGGGCCGTTTCTTCGTCACTAACATGGTGAGCACGGGGAGTTAGCCTGCCTGTGAGCTAATGTTAATAACTCTGGGCTGTGCTGAGACTTAAAGCTGATCAGAATCATGTCAGGGACAAACCCCTGGACCCGGAGCCGAGAGAGGATGAGGCGGTTCCCCGACCTGCTGGCCCAGTGCTCCACAGAGGCAGCAGTTTATGGGAAATGTGTGGTCTCCACTACTACTGGTAAACAGGAGCTGAAGAAAGATTTATGTGTAAAAGAGTTTGAAGCCCTGAAGACCTGCTTTGTCTCTGCTGCAAAACGGGGTGTGAAGTAGATGGAGTGCACAAAGCCATTCATTGACCATCATGTtttataaacatacatttatttgtatagttacaatataaaaaacagttgCTGCCATTTTTATTTACCAGTATACATAgtgacattatttttaatatttgaataatatatGTTGGTTCAGCATATATTTGTATTGTCCTCGtgtataaaacataaatgaatTGTATGACACTTGGTTTTGTGTGAGCATGAGTAATAATAAAGAATGAATGTgaatagtaaggaaa
>XM_022669016.1
AGGGGGCGGGTCATACAGATGGTTGACCAATCACTGGTGTGAGAGGGCGGGCCGTTTCTTCGTCACTAACATGGAGTTAGCCTGCCTGTGAGCTAATGTTAATAACTCTGGGCTGTGCTGAGACTTAAAGCTGATCAGAATCATGTCAGGGACAAACCCCTGGACCCGGAGCCGAGAGAGGATGAGGCGGTTCCCCGACCTGCTGGCCCAGTGCTCCACAGAGGCAGCAGTTTATGGGAAATGTGTGGTCTCCACTACTACTGGTAAACAGGAGCTGAAGAAAGATTTATGTGTAAAAGAGTTTGAAGCCCTGAAGACCTGCTTTGTCTCTGCTGCAAAACGGGGTGTGAAGTAGATGGAGTGCACAAAGCCATTCATTGACCATCATGTtttataaacatacatttatttgtatagttacaatataaaaaacagttgCTGCCATTTTTATTTACCAGTATACATAgtgacattatttttaatatttgaataatatatGTTGGTTCAGCATATATTTGTATTGTCCTCGtgtataaaacataaatgaatTGTATGACACTTGGTTTTGTGTGAGCATGAGTAATAATAAAGAATGAATGTgaatagtaaggaaa

Function

NR:

description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 8

GO: NA

KEGG:

id description
K24726 NDUFAF8; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 8

RNA

RNA id representative length rna type GC content exon number start site end site
TU47047 False 551 lncRNA 0.53 4 6543173 6546514
XM_015608363.2 True 648 mRNA 0.41 4 6543144 6546582
XM_022669016.1 False 614 mRNA 0.41 4 6543144 6546559

Neighbor

gene id symbol gene type direction distance location
LOC103025956 fscn2,LOC107684083,LOC107722237,LOC107581600 coding downstream 255511 6273871 ~ 6287633 (-)
birc5 birc5,birc5a,LOC107684154,LOC107581679,LOC107722191,LOC108273465 coding downstream 272201 6268401 ~ 6270943 (-)
tmem235 tmem235 coding downstream 276467 6256404 ~ 6266677 (-)
pgs1 pgs1,LOC107690911,LOC107755482,LOC107722233,LOC107601408 coding downstream 365043 6153694 ~ 6178101 (-)
afap1l2 afap1l2 coding downstream 504552 5980989 ~ 6038592 (-)
LOC103027554 NA coding upstream 6751 6553333 ~ 6558835 (-)
bicral gltscr1l coding upstream 20807 6567389 ~ 6578059 (-)
LOC103045903 LOC108426443 coding upstream 158486 6705068 ~ 6711220 (-)
LOC103031455 si:ch73-127m5.2,LOC108426537,LOC107749848,LOC107561855,LOC107684095,LOC108274350,LOC107601426 coding upstream 164732 6711314 ~ 6715739 (-)
LOC103032713 camk2g1,camk2g,LOC108410509,LOC108273829,LOC107561852,LOC107684098,LOC107690933 coding upstream 340127 6886709 ~ 6993101 (-)
G34939 NA non-coding downstream 182766 6359911 ~ 6360378 (-)
G34829 trub1,LOC107755443,LOC107702428 non-coding downstream 390283 6149230 ~ 6152861 (-)
G34791 NA non-coding downstream 499705 6042925 ~ 6043439 (-)
G34769 NA non-coding downstream 530475 5927689 ~ 6012669 (-)
G34765 adrb1 non-coding downstream 651153 5887038 ~ 5891991 (-)
G34987 timm23a,timm23,LOC103030206,LOC108426535,LOC107690962,LOC107561858,LOC107684090 non-coding upstream 128997 6675579 ~ 6679954 (-)
G34988 NA non-coding upstream 133769 6680351 ~ 6680909 (-)
G34997 NA non-coding upstream 182279 6728861 ~ 6729154 (-)
G34998 NA non-coding upstream 184360 6730942 ~ 6731499 (-)
G35069 NA non-coding upstream 414591 6961173 ~ 6961993 (-)
G34953 NA other downstream 1780 6537021 ~ 6541364 (-)
LOC103026268 bahcc1 other downstream 29443 6366684 ~ 6513701 (-)
ablim1 ablim1 other downstream 395833 6049001 ~ 6147311 (-)
G34770 NA other downstream 603744 5935835 ~ 5939400 (-)
ccdc186 ccdc186,LOC107755417,LOC107689962 other downstream 614990 5903588 ~ 5928154 (-)
G34981 qki2,LOC103029551,LOC108426533 other upstream 73098 6619680 ~ 6653585 (-)
LOC103030829 NA other upstream 141585 6688167 ~ 6696291 (-)
G35429 NA other upstream 2378246 8924828 ~ 8927717 (-)
tbata NA other upstream 2392351 8938933 ~ 9003896 (-)
G35512 NA other upstream 2657988 9204570 ~ 9205911 (-)

Expression


Co-expression Network