G34987 (timm23a,timm23,LOC103030206,LOC108426535,LOC107690962,LOC107561858,LOC107684090)


Basic Information

Item Value
gene id G34987
gene name timm23a,timm23,LOC103030206,LOC108426535,LOC107690962,LOC107561858,LOC107684090
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 6675579 ~ 6679954 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU47088
TTAGCTTAGACACATCTGACCACATATAAAaggtacatttttatattttccccAAGACTTGTTTGTGAACACCTGCATGAACCTGGTAGGCTCAGACACTGCTTAAAGTCTCGGTAGTAAAATGTGTACAGATTGAAAGACAATGTTGGAAAGAAACAGGTTCATATTATACTGGGGCTTGGCCATTGTATAAATGACACTTCAGTTTAATCCCAACATTACCCAATATGCTCTCATGACtgaaagacatttttaaatatggctAAAGATGAGTCCAATGCATTTAAGGCAGATGATTTCTgccttttaataatattcatcacacaacacagctttaaacaaaaacaaatgttggTGGTCCAAGGATCCAAAACGTTGGCCGCTGCTCCTCTAAATAGGACAAGGCTGTTGAGGACAGTTTAAGAGTCAAAATGTCCATGGTTTGAGCTCTTCAGGGTCCTCTTCAATATCGTGAAGGAGTTTTGCCTTTAAGGTGATCCCAGTTGTTGTACAGGGCATACAAGCCTGAAAGAGCTAACCCAGCAATTCCTCCTCTGGCAACTCCTTTCAGGCCACTTGTGGCTTTATACATCATCCCTGTTAATGTTCCAGCAGCTATTGTGTTGAGGTCATCCTCTGCTCCTCTGGCTTTCTCAATGGCTACCCCGAACACGCTATACAACAGAGCAACTGATCCTAGTGTGTTAGCCCATGATGCACCCTGTCGTGTGACCATGTTTAAAATCtGTACGTTTCTAGGTTTTGACCAGGCCATGTCTCTGGTCTCTGTAATGCCCATACGGAGCCCATTAAGTGTTCCCAAAGCAGCTCCTGTTATACAAGACCCTCCTATGGTAAAGAATGCCAGTTCAAATCGTCCACGGGTTTTGTTTGCTCCAGTTGGCAGTATAAATTCATCAGAGTCCTGAACAAGGTAGCGAGGATCGACATTAAGGTAAGGAGAGAGTGGGCTCATTCCAGTcaGAGGCACCCCAGCGAGCTCGTTGTTGGAGTACTCCGGAGCTCCGCCGCCGAAAAGGCCCCCCATTCCGCCTTTAAAAGACCCCGATCCCGCCGCGTTGTCGTCCATGTTGTCACTCACTGCTGTGAATCTGATATGAAGTCAGAGAGCGGAGATCCTGCTGAACAGAGCCGCCGCCGCTGAGTCGCAGCCCAAGTACTGTTCCAATTCGAATTGAGTACAGACGTGTGTACTTGAGTATTGAGAAACGGCCACAGACTGCAGTCCTGAATAAGTTACCTGTACAGCTTATAAAACAGCAGGATCTGTACAGAGCCCGAAATGAGGgggtctgtgtgtttctgtcaccGGTCAGATAGAGCATCCCTGACCTCCACCATGCGCTGCTGC

Function

symbol description
timm23a Predicted to enable protein transmembrane transporter activity. Predicted to be involved in protein import into mitochondrial matrix. Predicted to act upstream of or within protein transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Predicted to be part of TIM23 mitochondrial import inner membrane translocase complex. Predicted to be integral component of mitochondrial inner membrane. Orthologous to several human genes including TIMM23 (translocase of inner mitochondrial membrane 23).
timm23 Predicted to enable protein transmembrane transporter activity. Predicted to be involved in protein import into mitochondrial matrix. Located in mitochondrial inner membrane and mitochondrial intermembrane space. Is integral component of mitochondrial inner membrane. Part of TIM23 mitochondrial import inner membrane translocase complex.

NR:

description
mitochondrial import inner membrane translocase subunit Tim23

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47088 True 1372 lncRNA 0.50 7 6675579 6679954

Neighbor

gene id symbol gene type direction distance location
bicral gltscr1l coding downstream 97520 6567389 ~ 6578059 (-)
LOC103027554 NA coding downstream 116744 6553333 ~ 6558835 (-)
LOC103025956 fscn2,LOC107684083,LOC107722237,LOC107581600 coding downstream 387946 6273871 ~ 6287633 (-)
birc5 birc5,birc5a,LOC107684154,LOC107581679,LOC107722191,LOC108273465 coding downstream 404636 6268401 ~ 6270943 (-)
tmem235 tmem235 coding downstream 408902 6256404 ~ 6266677 (-)
LOC103045903 LOC108426443 coding upstream 25114 6705068 ~ 6711220 (-)
LOC103031455 si:ch73-127m5.2,LOC108426537,LOC107749848,LOC107561855,LOC107684095,LOC108274350,LOC107601426 coding upstream 31360 6711314 ~ 6715739 (-)
LOC103032713 camk2g1,camk2g,LOC108410509,LOC108273829,LOC107561852,LOC107684098,LOC107690933 coding upstream 206755 6886709 ~ 6993101 (-)
sec24c sec24c coding upstream 322186 7002140 ~ 7020769 (-)
faap100 NA coding upstream 389255 7069209 ~ 7075841 (-)
G34939 NA non-coding downstream 315201 6359911 ~ 6360378 (-)
G34829 trub1,LOC107755443,LOC107702428 non-coding downstream 522718 6149230 ~ 6152861 (-)
G34791 NA non-coding downstream 632140 6042925 ~ 6043439 (-)
G34769 NA non-coding downstream 662910 5927689 ~ 6012669 (-)
G34765 adrb1 non-coding downstream 783588 5887038 ~ 5891991 (-)
G34988 NA non-coding upstream 397 6680351 ~ 6680909 (-)
G34997 NA non-coding upstream 48907 6728861 ~ 6729154 (-)
G34998 NA non-coding upstream 50988 6730942 ~ 6731499 (-)
G35069 NA non-coding upstream 281219 6961173 ~ 6961993 (-)
G35077 kctd2,LOC106589267,LOC107706864,LOC108410512 non-coding upstream 354776 7034730 ~ 7035818 (-)
G34981 qki2,LOC103029551,LOC108426533 other downstream 21994 6619680 ~ 6653585 (-)
ndufaf8 NA other downstream 128997 6543144 ~ 6546582 (-)
G34953 NA other downstream 134215 6537021 ~ 6541364 (-)
LOC103026268 bahcc1 other downstream 161878 6366684 ~ 6513701 (-)
ablim1 ablim1 other downstream 528268 6049001 ~ 6147311 (-)
LOC103030829 NA other upstream 8213 6688167 ~ 6696291 (-)
G35429 NA other upstream 2244874 8924828 ~ 8927717 (-)
tbata NA other upstream 2258979 8938933 ~ 9003896 (-)
G35512 NA other upstream 2524616 9204570 ~ 9205911 (-)
rpl38 NA other upstream 2746121 9426075 ~ 9431228 (-)

Expression


Co-expression Network