G34988


Basic Information

Item Value
gene id G34988
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 6680351 ~ 6680909 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU47089
agctGAAGATTTAGTGTCATCTGGGTGAAGGGATGAAGGGAATATGCTGTAATTGCAGAGACCAAAGCGTTAAAGCTTCATGAAGCTAGAGAATCATGAATCACCTCTTCAAATGCCAGCACAGATTACCTCAAGAGCTGTACTGCAGCATCTTAGCCAATTAACTGATTTCAGTATTTTGTAGGGAATTGAAATAGGAACTGAAAAAAGACttggttttatctgtgcagCATCTTTAAGCATTAAaggtacactatatggacaaaagctAACAGCAGTTTTAAGTCTAACTACCTCCACTTTTCAACAATATCACTGGCAGTTGATGGTGGAATACAATGTAGTGCAGGAAAAATTACAAACCTACTTATTACAACAGTTGCACTCTGTTACAATACCACACTAGAGTCAATTGAGCTATTTACTGTTGGACACATACTTTTACTTATTTGTAAAGGCAGGCAGCATGCCTATGTGCTTAACTGTATAAATATGTGGCagtaagactgaatgaaacacTTGAATTCGATTACAATTGCAATTTGTCcctcttctgtcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47089 True 559 lncRNA 0.36 1 6680351 6680909

Neighbor

gene id symbol gene type direction distance location
bicral gltscr1l coding downstream 102292 6567389 ~ 6578059 (-)
LOC103027554 NA coding downstream 121516 6553333 ~ 6558835 (-)
LOC103025956 fscn2,LOC107684083,LOC107722237,LOC107581600 coding downstream 392718 6273871 ~ 6287633 (-)
birc5 birc5,birc5a,LOC107684154,LOC107581679,LOC107722191,LOC108273465 coding downstream 409408 6268401 ~ 6270943 (-)
tmem235 tmem235 coding downstream 413674 6256404 ~ 6266677 (-)
LOC103045903 LOC108426443 coding upstream 24159 6705068 ~ 6711220 (-)
LOC103031455 si:ch73-127m5.2,LOC108426537,LOC107749848,LOC107561855,LOC107684095,LOC108274350,LOC107601426 coding upstream 30405 6711314 ~ 6715739 (-)
LOC103032713 camk2g1,camk2g,LOC108410509,LOC108273829,LOC107561852,LOC107684098,LOC107690933 coding upstream 205800 6886709 ~ 6993101 (-)
sec24c sec24c coding upstream 321231 7002140 ~ 7020769 (-)
faap100 NA coding upstream 388300 7069209 ~ 7075841 (-)
G34987 timm23a,timm23,LOC103030206,LOC108426535,LOC107690962,LOC107561858,LOC107684090 non-coding downstream 397 6675579 ~ 6679954 (-)
G34939 NA non-coding downstream 319973 6359911 ~ 6360378 (-)
G34829 trub1,LOC107755443,LOC107702428 non-coding downstream 527490 6149230 ~ 6152861 (-)
G34791 NA non-coding downstream 636912 6042925 ~ 6043439 (-)
G34769 NA non-coding downstream 667682 5927689 ~ 6012669 (-)
G34997 NA non-coding upstream 47952 6728861 ~ 6729154 (-)
G34998 NA non-coding upstream 50033 6730942 ~ 6731499 (-)
G35069 NA non-coding upstream 280264 6961173 ~ 6961993 (-)
G35077 kctd2,LOC106589267,LOC107706864,LOC108410512 non-coding upstream 353821 7034730 ~ 7035818 (-)
G35078 NA non-coding upstream 355352 7036261 ~ 7040642 (-)
G34981 qki2,LOC103029551,LOC108426533 other downstream 26766 6619680 ~ 6653585 (-)
ndufaf8 NA other downstream 133769 6543144 ~ 6546582 (-)
G34953 NA other downstream 138987 6537021 ~ 6541364 (-)
LOC103026268 bahcc1 other downstream 166650 6366684 ~ 6513701 (-)
ablim1 ablim1 other downstream 533040 6049001 ~ 6147311 (-)
LOC103030829 NA other upstream 7258 6688167 ~ 6696291 (-)
G35429 NA other upstream 2243919 8924828 ~ 8927717 (-)
tbata NA other upstream 2258024 8938933 ~ 9003896 (-)
G35512 NA other upstream 2523661 9204570 ~ 9205911 (-)
rpl38 NA other upstream 2745166 9426075 ~ 9431228 (-)

Expression


Co-expression Network