G34998


Basic Information

Item Value
gene id G34998
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 6730942 ~ 6731499 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU47100
AGTGACGTGGGAAATTTCATTATCACCATGTTATTACGATTATAACCACCTTGTTATGACAAATGTAATAATTTTATGCATGTTCATTTCACTAGATGTGATCATTTGTATGCatggttattttattagatgTGCTTAATCACACTTAATATTCACAGTGGTAATTCACTTCATATTAGCTCGTTTTGCAGAGTTACTCTTTAGGTCATTCCGACATTTGTGTACATGCTAGCTAGCAGAGAAACCTTGTCTGATAACCATTTTGGGTAAACACCAGGATGTGAACGTGAAGAGGTTATGCTGACATTTCTGACGAGAAACAACCCTAACAACTCTGTCTGGGAACAGAAGGGAGTTTCTGTCTTGGGATAGAAGGGAGATTTGAAGGATGCCGTTGCAAGCGGAAACCCTATGTCCATATATGGTTTACGGTTCCGGATACAGCGGAGCGGGGATAAATAACGGCTCTGAGAAACTGTTACTCTCAGAGCACCTTCAGAGCGTGATGATTTCATGACTGATTGTACTCTCAATAAtttgcattaataaaaacttgTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47100 True 558 lncRNA 0.49 1 6730942 6731499

Neighbor

gene id symbol gene type direction distance location
LOC103031455 si:ch73-127m5.2,LOC108426537,LOC107749848,LOC107561855,LOC107684095,LOC108274350,LOC107601426 coding downstream 15203 6711314 ~ 6715739 (-)
LOC103045903 LOC108426443 coding downstream 19722 6705068 ~ 6711220 (-)
bicral gltscr1l coding downstream 152883 6567389 ~ 6578059 (-)
LOC103027554 NA coding downstream 172107 6553333 ~ 6558835 (-)
LOC103025956 fscn2,LOC107684083,LOC107722237,LOC107581600 coding downstream 443309 6273871 ~ 6287633 (-)
LOC103032713 camk2g1,camk2g,LOC108410509,LOC108273829,LOC107561852,LOC107684098,LOC107690933 coding upstream 155210 6886709 ~ 6993101 (-)
sec24c sec24c coding upstream 270641 7002140 ~ 7020769 (-)
faap100 NA coding upstream 337710 7069209 ~ 7075841 (-)
chad chad,LOC107706882,LOC107675646,LOC107727306,LOC107552753,LOC107698804 coding upstream 365543 7097042 ~ 7104020 (-)
armc7 armc7,LOC107706878 coding upstream 381627 7113126 ~ 7115766 (-)
G34997 NA non-coding downstream 1788 6728861 ~ 6729154 (-)
G34988 NA non-coding downstream 50033 6680351 ~ 6680909 (-)
G34987 timm23a,timm23,LOC103030206,LOC108426535,LOC107690962,LOC107561858,LOC107684090 non-coding downstream 50988 6675579 ~ 6679954 (-)
G34939 NA non-coding downstream 370564 6359911 ~ 6360378 (-)
G34829 trub1,LOC107755443,LOC107702428 non-coding downstream 578081 6149230 ~ 6152861 (-)
G35069 NA non-coding upstream 229674 6961173 ~ 6961993 (-)
G35077 kctd2,LOC106589267,LOC107706864,LOC108410512 non-coding upstream 303231 7034730 ~ 7035818 (-)
G35078 NA non-coding upstream 304762 7036261 ~ 7040642 (-)
G35094 NA non-coding upstream 333026 7064525 ~ 7066706 (-)
G35099 NA non-coding upstream 345726 7077225 ~ 7077629 (-)
LOC103030829 NA other downstream 34651 6688167 ~ 6696291 (-)
G34981 qki2,LOC103029551,LOC108426533 other downstream 77357 6619680 ~ 6653585 (-)
ndufaf8 NA other downstream 184360 6543144 ~ 6546582 (-)
G34953 NA other downstream 189578 6537021 ~ 6541364 (-)
LOC103026268 bahcc1 other downstream 217241 6366684 ~ 6513701 (-)
G35429 NA other upstream 2193329 8924828 ~ 8927717 (-)
tbata NA other upstream 2207434 8938933 ~ 9003896 (-)
G35512 NA other upstream 2473071 9204570 ~ 9205911 (-)
rpl38 NA other upstream 2694576 9426075 ~ 9431228 (-)
clrn3 NA other upstream 4322160 11053659 ~ 11083182 (-)

Expression


Co-expression Network