G35021


Basic Information

Item Value
gene id G35021
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 6902417 ~ 6903997 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU47135
ACTCCATCTGCCTTTTTGTTGAGTAAACTTTTACATGCtgcaaagaaaatgagagagtcTGAATTAGTGTATGCTTAATAAAAGCCATTGATCGTGCTCATATTCCTAAACTTCTGACTCAACTAATTCACATAttttaatgaatcatttatttcaTGCTAATCCTAGTGCAGACGGGAAGAAGTAAATTGTTCTCTATTCGAGACTACAGGCATAATGAAGGAAAATCACAGCTAATGTATGcaattgatttcctttaaatgcaAACATAATTTCCCGGCGGTCTGATTTAGAGGTCTTGAGGCAGTGGAGGTGAGTGAGCTTCAATACACTGCAGATTACCTTCCCTGCTAATGACATGGCTTATGTGGGGCCTTAACAAATGTATAAGGCAGTGACCCATtcaacaacacactcacacaaaccaAAGTCGGAAGCTTCGCGTTCAAGAGCCCCATTAAGTTCCTTACCTTCCATATACAAGTGGAAAGGAAGGACGATGGGGAAGAAAGGcaagattgagagagaaaaCAACAATCAACAGAGTTGCAAAGAGGAAGGCGGATGGAGCTTGAAGGTGGAAGGCATCATTTGTTTTTGCAAGCCCACTGGTGTTACATGCTGCACTCAGTATGAGGTAATCAGAGCTAGTGGTGGGTGCAATTTACCATACAGCCATCCATGCAGTGCCAACAGGGTAAACTACAAGTCTTATAATGGACTTGTAAATTAAGGGACTCTCATAAACTGGTGTCCTTAAACTTATCAGAAATCTGTTAGACTTTTGCTGTGTTTAGTAAGGTCTTAAGCCAATGCAAGCCATGtttgaaaaaaacattactcCCATTTAACCCATTTAAACAGTCTGATGGAGAGAGGACTGTTGAAAGTATGCCTTTAAATCAGTCCAAAGTTAAATTACTATTGCATATCTAGATATTAACAGAGTATGGAAGGAATGTTGTCTTCAAACCAGCCCTAAATATCTTCGTAACTACCTTCCTTGTGTCAAGTTGCATCTCAAAGTTAGCAAgtgcaaataaaagctaaattttGAAACTAATTATGAGATCTTCTTAGGGTGTTCTCACACATGACAAAAGTTCAAACAAAGGTTCGCGTTTTGACATTGTATGCGTTTGTTACGGTGGCTTAAAGAGCCACTTAACTCTAAACCatattttgaaatgtgttcctttgaagtaatgaagcataccagtcctgcttaaaagcTTTTATAAATCTTTCCAAACCTTTTAAATTcttttattgtgattatatctGCGTCTGCAGCGCCttctcaggtttaactgtgcaatccaatCATCTGTGTCAGGCACACTTCTGATGCTGTAGCTCAGCCAAATCAGCTCCCCCTCCTGCtttgcctctaaacccatacatccagtttccctcccaaactacttctCCCATTTTATAGCctatttcaaatttgagctaagGACGGAGTTAGTGAAAATCATGGGGTTATTAAAGAGGAAGAGCCAAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47135 True 1513 TUCP 0.36 2 6902417 6903997

Neighbor

gene id symbol gene type direction distance location
LOC103031986 ndst2b,LOC108410510,LOC108273828,LOC107755463,LOC107684097,LOC107749844 coding upstream 25384 6778202 ~ 6877033 (+)
LOC103046215 si:ch73-127m5.1,LOC108410513,LOC108273477,LOC107690930,LOC107755465,LOC107749846,LOC107684096,LOC105892755 coding upstream 125889 6733311 ~ 6776528 (+)
LOC103031150 LOC108426536 coding upstream 197419 6698639 ~ 6704998 (+)
LOC103030206 timm23a,timm23,LOC103030206,LOC108426535,LOC107690962,LOC107561858,LOC107684090 coding upstream 222396 6675542 ~ 6680021 (+)
prph2 prph2,prph2a,LOC107601435,LOC107581607,LOC107684088 coding upstream 313797 6583214 ~ 6588620 (+)
LOC103033683 LOC108410508 coding downstream 117850 7021847 ~ 7028159 (+)
kctd2 kctd2,LOC108410512,LOC107666921,LOC107727321,LOC107582756 coding downstream 125134 7029131 ~ 7040685 (+)
slc16a5 NA coding downstream 139485 7043482 ~ 7056429 (+)
LOC103036712 NA coding downstream 153911 7057908 ~ 7068528 (+)
acsf2 acsf2 coding downstream 174792 7078789 ~ 7112191 (+)
G35017 NA non-coding upstream 5024 6892505 ~ 6897393 (+)
G35016 LOC108410509 non-coding upstream 10613 6880483 ~ 6891804 (+)
G34930 NA non-coding upstream 183231 6718790 ~ 6719186 (+)
G34923 NA non-coding upstream 212278 6689792 ~ 6690139 (+)
G34916 NA non-coding upstream 232426 6669762 ~ 6669991 (+)
G35031 NA non-coding downstream 83835 6987832 ~ 7050629 (+)
G35034 sec24c non-coding downstream 101779 7005776 ~ 7009917 (+)
G35037 NA non-coding downstream 113316 7017313 ~ 7020803 (+)
G35096 NA non-coding downstream 172691 7076688 ~ 7077157 (+)
LOC111192361 NA non-coding downstream 211858 7115855 ~ 7119167 (+)
G34931 NA other upstream 170993 6730954 ~ 6731424 (+)
LOC103029551 qki2,LOC103029551,LOC108426533,LOC107684089,LOC108274051,LOC107749853,LOC107755469 other upstream 238810 6592607 ~ 6663607 (+)
slc38a10 slc38a10,LOC102792191,LOC107749860 other upstream 360957 6502145 ~ 6541460 (+)
LOC103045604 LOC108426437,LOC107683136 other upstream 644367 6246646 ~ 6258050 (+)
dnmbp dnmbp,LOC107722208,LOC107684043 other upstream 1146301 5692522 ~ 5756116 (+)
fasn fasn other downstream 1482176 8386173 ~ 8438865 (+)
LOC103037241 wac,waca,LOC107738973,LOC107665881,LOC107749376 other downstream 1538135 8442132 ~ 8472989 (+)
LOC103024481 adamts14,LOC103367006 other downstream 1815357 8719354 ~ 8851392 (+)
G35744 mrpl38 other downstream 3567383 10471380 ~ 10475783 (+)
dock1 dock1,LOC107740868 other downstream 3843640 10747637 ~ 11001805 (+)

Expression


Co-expression Network