G35037


Basic Information

Item Value
gene id G35037
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 7017313 ~ 7020803 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU47156
TGAGGTGGGCCTGGTTGGTAGGCAGAAGCTGGGCCATTGTATGGCGCAAATTGGGCTGGATAACCACCTGGCACTTGCTGGCCCCCATAACCAGACTGAGGGTAGCCTTGGTAGCCAGGCTGCGGCTGCCCATAAGGAGAGGCCATGTGAGGTTGCTGGTTAACATTCATTTTCAGTTCATCACTAAATCTCCAATCCAGACAGATATATAAACGAACAAGCTAACAGGACAGCCAGCCACGCCCGTTCCCCAGCTGACAGGCGCTCTTCTACAAAACCAAGAGTACAATCGTCGTCTTCCCAAAGCGGTCTCGCCGTTAGCCGTCGTTAATCCCTCTTCCACCTCCTCGGTGTCTCCGCTACAGCTGACATTCGCACCGGATCCACAGTAACTTTGTGCCACGTCCACATCCGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47156 True 416 lncRNA 0.52 2 7017313 7020803

Neighbor

gene id symbol gene type direction distance location
LOC103031986 ndst2b,LOC108410510,LOC108273828,LOC107755463,LOC107684097,LOC107749844 coding upstream 140280 6778202 ~ 6877033 (+)
LOC103046215 si:ch73-127m5.1,LOC108410513,LOC108273477,LOC107690930,LOC107755465,LOC107749846,LOC107684096,LOC105892755 coding upstream 240785 6733311 ~ 6776528 (+)
LOC103031150 LOC108426536 coding upstream 312315 6698639 ~ 6704998 (+)
LOC103030206 timm23a,timm23,LOC103030206,LOC108426535,LOC107690962,LOC107561858,LOC107684090 coding upstream 337292 6675542 ~ 6680021 (+)
prph2 prph2,prph2a,LOC107601435,LOC107581607,LOC107684088 coding upstream 428693 6583214 ~ 6588620 (+)
LOC103033683 LOC108410508 coding downstream 1044 7021847 ~ 7028159 (+)
kctd2 kctd2,LOC108410512,LOC107666921,LOC107727321,LOC107582756 coding downstream 8328 7029131 ~ 7040685 (+)
slc16a5 NA coding downstream 22679 7043482 ~ 7056429 (+)
LOC103036712 NA coding downstream 37105 7057908 ~ 7068528 (+)
acsf2 acsf2 coding downstream 57986 7078789 ~ 7112191 (+)
G35034 sec24c non-coding upstream 7396 7005776 ~ 7009917 (+)
G35012 NA non-coding upstream 75042 6809228 ~ 6942271 (+)
G35017 NA non-coding upstream 119920 6892505 ~ 6897393 (+)
G35016 LOC108410509 non-coding upstream 125509 6880483 ~ 6891804 (+)
G34930 NA non-coding upstream 298127 6718790 ~ 6719186 (+)
G35096 NA non-coding downstream 55885 7076688 ~ 7077157 (+)
LOC111192361 NA non-coding downstream 95052 7115855 ~ 7119167 (+)
G35102 NA non-coding downstream 105151 7125954 ~ 7159316 (+)
LOC103039044 NA non-coding downstream 209450 7230253 ~ 7231321 (+)
G35143 NA non-coding downstream 212832 7233635 ~ 7233863 (+)
G35021 NA other upstream 113316 6902417 ~ 6903997 (+)
G34931 NA other upstream 285889 6730954 ~ 6731424 (+)
LOC103029551 qki2,LOC103029551,LOC108426533,LOC107684089,LOC108274051,LOC107749853,LOC107755469 other upstream 353706 6592607 ~ 6663607 (+)
slc38a10 slc38a10,LOC102792191,LOC107749860 other upstream 475853 6502145 ~ 6541460 (+)
LOC103045604 LOC108426437,LOC107683136 other upstream 759263 6246646 ~ 6258050 (+)
fasn fasn other downstream 1365370 8386173 ~ 8438865 (+)
LOC103037241 wac,waca,LOC107738973,LOC107665881,LOC107749376 other downstream 1421329 8442132 ~ 8472989 (+)
LOC103024481 adamts14,LOC103367006 other downstream 1698551 8719354 ~ 8851392 (+)
G35744 mrpl38 other downstream 3450577 10471380 ~ 10475783 (+)
dock1 dock1,LOC107740868 other downstream 3726834 10747637 ~ 11001805 (+)

Expression


Co-expression Network