G35069


Basic Information

Item Value
gene id G35069
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 6961173 ~ 6961993 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU47220
tcgaaATATTCATCATAAatttcatatttgcgtttttcgtacgtccatatttgatacAATGTGGACATATTATACATCATTCAAACTGTCTAACTCTCAAGATTATGGAACCATTGTACTATGGGATGTACTGTTCCTGAATTAGAACCGACACAGCCAGGCCCCACCCAGCGCTCACCTCAGACTCCTGCCTTTAAAATCGCTTTACATATCAGTAGGTCCATCAAGTCAGTCGTCAGTAATCCTCATTTAGGTCCAAACAGTGCTTGACGAAACTTGAGCCAGaagaatatatttgttttaaagccGTATTAAAACCCTCTGCCTTCCATTACTGCGTTATAACGCACATGTGAATGAAATCTGTCGGTCCATCAGATGACGCGTTTAAGAGGGGGCTCTCttgcaataaaaaacaaaaatagaaaatctgaaaagcgccttaAGATTTTTAAGTAGACAACAGGACCTCCTTGTCAATTATTATCTACTGCAGCCAAGCATCTTaacatatctttaaaaaaaaggcagaaattTTGGAGCAGCCAATCAGGTTATTATATCTTATTCAGGATAagacagttggtatcggtatcagtaCCCTATATCGGCacacaatatatgaaatatactgtatcatGATACATATCATATCACTAGGTTCTTGTTGATATACAGAAAACGTTTTTGCAGAGTTGTAGTGATTGCAGGATGATTGTAATGCGTTCAGCTGCTGCCCTGCTGCGCTCAGTTGGAATGTTTAGAATtaacacgcatacacacacttgTCTGTTTGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47220 True 799 lncRNA 0.38 2 6961173 6961993

Neighbor

gene id symbol gene type direction distance location
LOC103031455 si:ch73-127m5.2,LOC108426537,LOC107749848,LOC107561855,LOC107684095,LOC108274350,LOC107601426 coding downstream 245434 6711314 ~ 6715739 (-)
LOC103045903 LOC108426443 coding downstream 249953 6705068 ~ 6711220 (-)
bicral gltscr1l coding downstream 383114 6567389 ~ 6578059 (-)
LOC103027554 NA coding downstream 402338 6553333 ~ 6558835 (-)
LOC103025956 fscn2,LOC107684083,LOC107722237,LOC107581600 coding downstream 673540 6273871 ~ 6287633 (-)
sec24c sec24c coding upstream 40147 7002140 ~ 7020769 (-)
faap100 NA coding upstream 107216 7069209 ~ 7075841 (-)
chad chad,LOC107706882,LOC107675646,LOC107727306,LOC107552753,LOC107698804 coding upstream 135049 7097042 ~ 7104020 (-)
armc7 armc7,LOC107706878 coding upstream 151133 7113126 ~ 7115766 (-)
LOC103046826 grin2c,LOC108443561,LOC108273492,LOC107755516,LOC107702470,LOC107684146 coding upstream 210674 7172667 ~ 7229961 (-)
G34998 NA non-coding downstream 229674 6730942 ~ 6731499 (-)
G34997 NA non-coding downstream 232019 6728861 ~ 6729154 (-)
G34988 NA non-coding downstream 280264 6680351 ~ 6680909 (-)
G34987 timm23a,timm23,LOC103030206,LOC108426535,LOC107690962,LOC107561858,LOC107684090 non-coding downstream 281219 6675579 ~ 6679954 (-)
G34939 NA non-coding downstream 600795 6359911 ~ 6360378 (-)
G35077 kctd2,LOC106589267,LOC107706864,LOC108410512 non-coding upstream 72737 7034730 ~ 7035818 (-)
G35078 NA non-coding upstream 74268 7036261 ~ 7040642 (-)
G35094 NA non-coding upstream 102532 7064525 ~ 7066706 (-)
G35099 NA non-coding upstream 115232 7077225 ~ 7077629 (-)
G35135 NA non-coding upstream 160490 7122483 ~ 7123019 (-)
LOC103030829 NA other downstream 264882 6688167 ~ 6696291 (-)
G34981 qki2,LOC103029551,LOC108426533 other downstream 307588 6619680 ~ 6653585 (-)
ndufaf8 NA other downstream 414591 6543144 ~ 6546582 (-)
G34953 NA other downstream 419809 6537021 ~ 6541364 (-)
LOC103026268 bahcc1 other downstream 447472 6366684 ~ 6513701 (-)
G35429 NA other upstream 1962835 8924828 ~ 8927717 (-)
tbata NA other upstream 1976940 8938933 ~ 9003896 (-)
G35512 NA other upstream 2242577 9204570 ~ 9205911 (-)
rpl38 NA other upstream 2464082 9426075 ~ 9431228 (-)
clrn3 NA other upstream 4091666 11053659 ~ 11083182 (-)

Expression


Co-expression Network