G35096


Basic Information

Item Value
gene id G35096
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 7076688 ~ 7077157 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU47270
ctgttgtagaaaagaaaatgaacgaccggggtacaactcccctgcgtgttcgtttgatagagagagtcagacaggtggagtgaagttgaaagcaaaccaagtatttattacaaagcactgaatattcaggagaacccacacatgaaagaccgtctaacagccgtcccagcataagttctgaccccccctctgatctgactccatgtttataccccaaatgacgtgaaacctgctgatgaggcgttgctaaaatcatctcatgttagtagGCATATTCTCACGTGTTAGTGttcaagtttcacaggtctgaccggaccactagtgtttggccttgactgtgttcttccagaatggaacatcgtggcactatctgtgtgtgtgcgtcaccccccgctttgaagcagaggtttttagggaggcactcactcaccaaaaggcCGCTTTGATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47270 True 448 lncRNA 0.47 2 7076688 7077157

Neighbor

gene id symbol gene type direction distance location
LOC103036712 NA coding upstream 8160 7057908 ~ 7068528 (+)
slc16a5 NA coding upstream 20259 7043482 ~ 7056429 (+)
kctd2 kctd2,LOC108410512,LOC107666921,LOC107727321,LOC107582756 coding upstream 36003 7029131 ~ 7040685 (+)
LOC103033683 LOC108410508 coding upstream 48529 7021847 ~ 7028159 (+)
LOC103031986 ndst2b,LOC108410510,LOC108273828,LOC107755463,LOC107684097,LOC107749844 coding upstream 199655 6778202 ~ 6877033 (+)
acsf2 acsf2 coding downstream 1632 7078789 ~ 7112191 (+)
LOC103039861 stxbp4 coding downstream 198590 7275747 ~ 7292804 (+)
LOC103040176 LOC108443565 coding downstream 229149 7306306 ~ 7335081 (+)
ankfn1 ankfn1,LOC107684130,LOC107702427 coding downstream 275929 7353086 ~ 7466457 (+)
nog nog coding downstream 395750 7472907 ~ 7475245 (+)
G35031 NA non-coding upstream 26059 6987832 ~ 7050629 (+)
G35037 NA non-coding upstream 55885 7017313 ~ 7020803 (+)
G35034 sec24c non-coding upstream 66771 7005776 ~ 7009917 (+)
G35012 NA non-coding upstream 134417 6809228 ~ 6942271 (+)
G35017 NA non-coding upstream 179295 6892505 ~ 6897393 (+)
LOC111192361 NA non-coding downstream 38698 7115855 ~ 7119167 (+)
G35102 NA non-coding downstream 48797 7125954 ~ 7159316 (+)
LOC103039044 NA non-coding downstream 153096 7230253 ~ 7231321 (+)
G35143 NA non-coding downstream 156478 7233635 ~ 7233863 (+)
G35148 NA non-coding downstream 244763 7321920 ~ 7322957 (+)
G35021 NA other upstream 172691 6902417 ~ 6903997 (+)
G34931 NA other upstream 345264 6730954 ~ 6731424 (+)
LOC103029551 qki2,LOC103029551,LOC108426533,LOC107684089,LOC108274051,LOC107749853,LOC107755469 other upstream 413081 6592607 ~ 6663607 (+)
slc38a10 slc38a10,LOC102792191,LOC107749860 other upstream 535228 6502145 ~ 6541460 (+)
LOC103045604 LOC108426437,LOC107683136 other upstream 818638 6246646 ~ 6258050 (+)
fasn fasn other downstream 1309016 8386173 ~ 8438865 (+)
LOC103037241 wac,waca,LOC107738973,LOC107665881,LOC107749376 other downstream 1364975 8442132 ~ 8472989 (+)
LOC103024481 adamts14,LOC103367006 other downstream 1642197 8719354 ~ 8851392 (+)
G35744 mrpl38 other downstream 3394223 10471380 ~ 10475783 (+)
dock1 dock1,LOC107740868 other downstream 3670480 10747637 ~ 11001805 (+)

Expression


Co-expression Network