G35102


Basic Information

Item Value
gene id G35102
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 7125954 ~ 7159316 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU47278
ACAGGTCACAGTCACGATTCGTCTGGATCCTACCTGGAATCACTGGGCTCAAGGCATAAATACCCCCTGGACAGGGCACCCGTCTATCAAATGAATCAGTGTTCTTAACCTGGCAATCCATGTGAGCTTTGCATCTGGTGGGGAGGACTACACCGTTTTAGACACTTGCTGTTAGTTTGttcatattgtattttttaacttttgtgTGGACAATTATGTGGTTTTATGtatgtaaagaaataaatgtattatt

Function

GO:

id name namespace
GO:0006366 transcription by RNA polymerase II biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47278 True 253 lncRNA 0.41 2 7125954 7159316

Neighbor

gene id symbol gene type direction distance location
acsf2 acsf2 coding upstream 13763 7078789 ~ 7112191 (+)
LOC103036712 NA coding upstream 57426 7057908 ~ 7068528 (+)
slc16a5 NA coding upstream 69525 7043482 ~ 7056429 (+)
kctd2 kctd2,LOC108410512,LOC107666921,LOC107727321,LOC107582756 coding upstream 85269 7029131 ~ 7040685 (+)
LOC103033683 LOC108410508 coding upstream 97795 7021847 ~ 7028159 (+)
LOC103039861 stxbp4 coding downstream 116431 7275747 ~ 7292804 (+)
LOC103040176 LOC108443565 coding downstream 146990 7306306 ~ 7335081 (+)
ankfn1 ankfn1,LOC107684130,LOC107702427 coding downstream 193770 7353086 ~ 7466457 (+)
nog nog coding downstream 313591 7472907 ~ 7475245 (+)
LOC103035888 LOC107566522,LOC108435270,LOC107755508,LOC107684054,LOC108273414 coding downstream 424511 7583827 ~ 8281690 (+)
LOC111192361 NA non-coding upstream 6787 7115855 ~ 7119167 (+)
G35096 NA non-coding upstream 48797 7076688 ~ 7077157 (+)
G35031 NA non-coding upstream 75325 6987832 ~ 7050629 (+)
G35037 NA non-coding upstream 105151 7017313 ~ 7020803 (+)
G35034 sec24c non-coding upstream 116037 7005776 ~ 7009917 (+)
LOC103039044 NA non-coding downstream 70937 7230253 ~ 7231321 (+)
G35143 NA non-coding downstream 74319 7233635 ~ 7233863 (+)
G35148 NA non-coding downstream 162604 7321920 ~ 7322957 (+)
G35244 NA non-coding downstream 948844 8108160 ~ 8108470 (+)
G35299 NA non-coding downstream 1247535 8406851 ~ 8407393 (+)
G35021 NA other upstream 221957 6902417 ~ 6903997 (+)
G34931 NA other upstream 394530 6730954 ~ 6731424 (+)
LOC103029551 qki2,LOC103029551,LOC108426533,LOC107684089,LOC108274051,LOC107749853,LOC107755469 other upstream 462347 6592607 ~ 6663607 (+)
slc38a10 slc38a10,LOC102792191,LOC107749860 other upstream 584494 6502145 ~ 6541460 (+)
LOC103045604 LOC108426437,LOC107683136 other upstream 867904 6246646 ~ 6258050 (+)
fasn fasn other downstream 1226857 8386173 ~ 8438865 (+)
LOC103037241 wac,waca,LOC107738973,LOC107665881,LOC107749376 other downstream 1282816 8442132 ~ 8472989 (+)
LOC103024481 adamts14,LOC103367006 other downstream 1560038 8719354 ~ 8851392 (+)
G35744 mrpl38 other downstream 3312064 10471380 ~ 10475783 (+)
dock1 dock1,LOC107740868 other downstream 3588321 10747637 ~ 11001805 (+)

Expression


Co-expression Network