G51951



Basic Information


Item Value
gene id G51951
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 1267951 ~ 1270025 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU59197
TTATTAGTAGTAGTATTTTAGGAATGCCCTCTTTACAAGCCTCTTTGTAATGGAAAAAACATTCTACCCTTCTGCTGGTTCTGGCTGGCCAACCCTTTCAGCTTGTTTCAGATTGGTTTTAGGTACCAGACAGTTCCCGGTTCTTTAACCGCATAGGACCTGCAAAGAGCAAACCACATCTTTTAGCAGAGTAGAATGTTTTTTACTCACATAGCTAACAGCTCAAATAAAAATAATAATAATAATAAAGCACAAACATCTACCTATCTTATGCGATGGATGTAGCAGATAATAATCCTGGAGACAAAGTGTACATACAATTCACATAGAGAGACTAGTTCGATGTTTTCTTTTTTCTTCTTGACCAAGATCTTACAGCCATGTAAAGTTTGAATTCAGTGCAACTACAACAAAGAGCCATGAGAGGGAGATATAACAAAGCAAAAAGTGAAGCTCATGACTAGTACAACAGATGTCACTTTAAAAATTATTGCTTGCTTAAAAGTTTATGCATGTTCATTTTATGCCATCCATATAGTAATTTCTAAACAATAGTTGGGTTAAATAAAACTGCCCAGCATGTTGGTCAAACATTTAACCCAACTGCTGGGTTAAAACACTTCTTCCTCTTCGCACAGGGAACTATATTGGCATTTTAGTGTTCAGTTAGTTCATGGTGAAAAACAAGTGCTAGAGACAAGGGGAGATTAATTTGCTTGTTACCCTAAATTAAAATTCTTACATTTCTGCCCTTCAGAAAGGCACTAGAATGTACAATTGTAGAAAATGTTTACTTCAGACTTATTGTGATTGGTTAGCTGACTGAAAGTTGTTAGCATTTCATCAAAATAATTTGTCTGAAAACTGGCAAATAATTTATTTTCAGAAGGGATGTGAAAGACTGAATCAGTGACACCACAGACAAAAACAGGAAGAAGTTTGAAGACCAATATGTGGTTTCTTGACAAAGACCCCAGAGAAGCAGAAGAGCAGATGCAGGGGGAATTGTGGTTAGCTAAACTTTGCTAAAATGGACGGAAGTTGCTGTGTTTCCTTTTTACAGGAAAAGGAACAGTTTGTAAACTTGATAGAAAAACTTTTTACACTGAAGGCCTGTTACTGTATTTGTTAATCTTTGTAAACGTTAGTTAAAGGTGCAATGTGTAATTTTTAGAACTTACATAATGAACCGTTATGTTTTTATTACCTTAGAATGAGCCATCTCTTCCTACACCGTGGGTCCCCTTACATGTTAAGTCGCCATTTTGCGCTGGCATGTAGCCCTAAATGGGTACTGGAGTGGCTACTCTCTGCTGTCTCAGACGACGTCATCCTTGTCCTGTGTTAGCCACCATAGCTTCTCCATATTGCAATTCGCAACCTCACAGCTAGATGCCGCTAAAATTTACACACTGCACACTGCCACTCAAGTTAATACACATCATATTAAACCATCTTAGAATGTCATGATAATATCATATTTCTTTTTGAACCTTACAGTATTATGTGAAATTGTCAAAGAGCATACATTTCAAAAGACAAATTACATTCAAGTTATATTATGAAGTTATATTCAATGCAGTATCCAGATGAAATGTTCAGTTCAGTTGAGTTCAGTTATATTATGTCATCTACACTGAGGTCATGACCTGTCTTATAATGGCTGTATTTATATTACCTGTTTAACTATGGTTATGATGAGATCTTGTACCAATTACCAAAATCCGATATTAAAACGTGATATTTCTCATCGAGGTGAACAGCTGCCTCGCAATATCAGCAGTGAATTTGAGTTTAATGTGGGTATAATATCAGTCATAAATTAATCATTAAAAAAAATTGTAATTATTCATAAAAACGGCATATAAATTCATTAGTTTCATAAAACTTTAAAAAGTTTAATGAAACTTCAATTCAACTACCAATAATGAGGCATCTATGTATATATTTCTATGGAAGTAGCCTTCTTCTCTGGCTAACTTGAAGGGGGCGGCACCCCAGCGCCCCCTATGGACCAGCCACCGCTGATGATTACTTGATTAAAGGGTTAGTTTACCTAAAAATGAAATTTCTGT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU59197 True 2075 lncRNA 0.36 1 1267951 1270025

Neighbor


gene id symbol gene type direction distance location
CI01000009_01257207_01258196 GPR18 coding downstream 9755 1256477 ~ 1258196 (-)
CI01000009_01208525_01212914 NA coding downstream 53434 1208374 ~ 1214517 (-)
CI01000009_01138569_01164523 NA coding downstream 103414 1138249 ~ 1164537 (-)
CI01000009_01128947_01131135 NA coding downstream 136790 1128884 ~ 1131161 (-)
CI01000009_01121956_01122628 NA coding downstream 142164 1121187 ~ 1125787 (-)
CI01000009_01293719_01294750 NA coding upstream 22691 1292716 ~ 1294963 (-)
CI01000009_01327537_01337349 NA coding upstream 57287 1327312 ~ 1337846 (-)
CI01000009_01386589_01389680 NA coding upstream 116352 1383864 ~ 1390149 (-)
CI01000009_01394603_01397604 ZIC5 coding upstream 124533 1394558 ~ 1398473 (-)
CI01000009_01423940_01424233 NA coding upstream 153686 1423711 ~ 1424573 (-)
G52094 NA non-coding downstream 1339 1266178 ~ 1266612 (-)
G52091 NA non-coding downstream 23707 1242744 ~ 1244244 (-)
G52089 NA non-coding downstream 26344 1241261 ~ 1241607 (-)
G52088 NA non-coding downstream 27165 1240255 ~ 1240786 (-)
G52087 NA non-coding downstream 27713 1239481 ~ 1240238 (-)
G52096 NA non-coding upstream 13518 1283543 ~ 1283907 (-)
G52102 NA non-coding upstream 35244 1305269 ~ 1315480 (-)
G52160 NA non-coding upstream 156049 1426074 ~ 1431565 (-)
G52157 NA non-coding upstream 176469 1446494 ~ 1450926 (-)
G52098 NA other upstream 131907 1401932 ~ 1407627 (-)
G52410 NA other upstream 1281699 2551724 ~ 2562533 (-)
CI01000009_02885473_02893975 NA other upstream 1613663 2883688 ~ 2893975 (-)
CI01000009_03261739_03262843 NA other upstream 1991178 3261038 ~ 3262843 (-)

Expression



Co-expression Network