Gene
RNA
| Item | Value |
|---|---|
| gene id | G35533 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 9371570 ~ 9406210 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU47847 | True | 303 | lncRNA | 0.41 | 2 | 9371570 | 9406210 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC103043335 | npffr1 | coding | upstream | 103974 | 9220731 ~ 9267596 (+) |
| LOC103022911 | LOC108413183 | coding | upstream | 163886 | 9177238 ~ 9207684 (+) |
| LOC103023541 | LOC108441018,LOC107709014,LOC107595168 | coding | upstream | 342415 | 8994443 ~ 9029155 (+) |
| pald1 | pald1 | coding | upstream | 667973 | 8599182 ~ 8703597 (+) |
| LOC103030936 | bambi,bambia,LOC107749375,LOC107676764,LOC107584374,LOC108274338,LOC107549411 | coding | upstream | 884119 | 8482871 ~ 8487451 (+) |
| LOC103040920 | sdk2,sdk2b | coding | downstream | 423275 | 9829485 ~ 10373341 (+) |
| cdc42ep4 | NA | coding | downstream | 978802 | 10385012 ~ 10424245 (+) |
| LOC103039374 | NA | coding | downstream | 1031113 | 10437323 ~ 10441938 (+) |
| trim65 | trim65 | coding | downstream | 1070180 | 10476390 ~ 10485798 (+) |
| foxi2 | foxi2 | coding | downstream | 1634488 | 11040698 ~ 11042893 (+) |
| G35495 | NA | non-coding | upstream | 161373 | 9209805 ~ 9210197 (+) |
| G35479 | NA | non-coding | upstream | 223405 | 9146371 ~ 9148165 (+) |
| G35454 | NA | non-coding | upstream | 338378 | 9029468 ~ 9033192 (+) |
| G35400 | NA | non-coding | upstream | 470119 | 8901185 ~ 8901451 (+) |
| G35362 | NA | non-coding | upstream | 808611 | 8560361 ~ 8562959 (+) |
| G35539 | NA | non-coding | downstream | 18765 | 9424975 ~ 9429378 (+) |
| G35552 | NA | non-coding | downstream | 47659 | 9453869 ~ 9454168 (+) |
| G35554 | NA | non-coding | downstream | 48272 | 9454482 ~ 9454817 (+) |
| G35609 | NA | non-coding | downstream | 299839 | 9706049 ~ 9706302 (+) |
| G35621 | NA | non-coding | downstream | 426953 | 9833163 ~ 9834716 (+) |
| LOC103024481 | adamts14,LOC103367006 | other | upstream | 520178 | 8719354 ~ 8851392 (+) |
| LOC103037241 | wac,waca,LOC107738973,LOC107665881,LOC107749376 | other | upstream | 898581 | 8442132 ~ 8472989 (+) |
| fasn | fasn | other | upstream | 932705 | 8386173 ~ 8438865 (+) |
| G35021 | NA | other | upstream | 2467573 | 6902417 ~ 6903997 (+) |
| G34931 | NA | other | upstream | 2640146 | 6730954 ~ 6731424 (+) |
| G35744 | mrpl38 | other | downstream | 1065170 | 10471380 ~ 10475783 (+) |
| dock1 | dock1,LOC107740868 | other | downstream | 1341427 | 10747637 ~ 11001805 (+) |
| G35903 | NA | other | downstream | 2395248 | 11801458 ~ 11802204 (+) |
| bnip3 | bnip3,LOC107553688,LOC107653114,LOC107582186,LOC107706607 | other | downstream | 2705480 | 12111690 ~ 12566941 (+) |
| G35967 | NA | other | downstream | 2960330 | 12366540 ~ 12370962 (+) |
