G35794


Basic Information

Item Value
gene id G35794
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 10733778 ~ 10734007 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU48160
tttgtgtgtgtgtgtttgtttgtgtgtgtgtgtttgtttgtgtgtgtgtgtttgtttgtgtgtgtgtgtttgtttgtgtgtgtgtgtgtgtttgtgtttgtgtttgtgtagagtAAAGAGCGTGACTGATGTCTCCTTACACTGTGAGTAAGTAGAGTGTGGTCTCTGTAATGGATAAGGTTGTGTTTCAGTAGTTAGTAGGTGTTATGTGAGGTGTTTATAGAGATCGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48160 True 230 lncRNA 0.40 1 10733778 10734007

Neighbor

gene id symbol gene type direction distance location
trim65 trim65 coding upstream 247980 10476390 ~ 10485798 (+)
LOC103039374 NA coding upstream 291840 10437323 ~ 10441938 (+)
cdc42ep4 NA coding upstream 309533 10385012 ~ 10424245 (+)
LOC103040920 sdk2,sdk2b coding upstream 360437 9829485 ~ 10373341 (+)
LOC103043335 npffr1 coding upstream 1466182 9220731 ~ 9267596 (+)
foxi2 foxi2 coding downstream 306691 11040698 ~ 11042893 (+)
ptpre ptpre,LOC103359937,LOC107387775 coding downstream 450883 11184890 ~ 11217372 (+)
glrx3 glrx3,LOC107745700 coding downstream 1339356 12073363 ~ 12094731 (+)
jakmip3 jakmip3 coding downstream 1869950 12603957 ~ 12664928 (+)
dpysl4 dpysl4,LOC107653119,LOC107706606,LOC107582189,LOC107654562,LOC107568139 coding downstream 1937538 12671545 ~ 12692068 (+)
G35748 NA non-coding upstream 245725 10487115 ~ 10488053 (+)
G35677 NA non-coding upstream 650690 10081497 ~ 10083088 (+)
G35645 NA non-coding upstream 773911 9959325 ~ 9959867 (+)
G35621 NA non-coding upstream 899062 9833163 ~ 9834716 (+)
G35609 NA non-coding upstream 1027476 9706049 ~ 9706302 (+)
G35810 NA non-coding downstream 113880 10847887 ~ 10848371 (+)
G35825 NA non-coding downstream 344865 11078872 ~ 11079443 (+)
LOC103033033 NA non-coding downstream 356285 11090292 ~ 11264386 (+)
G35832 NA non-coding downstream 380642 11114649 ~ 11200184 (+)
G35833 NA non-coding downstream 419892 11153899 ~ 11159812 (+)
G35744 mrpl38 other upstream 257995 10471380 ~ 10475783 (+)
LOC103024481 adamts14,LOC103367006 other upstream 1882386 8719354 ~ 8851392 (+)
LOC103037241 wac,waca,LOC107738973,LOC107665881,LOC107749376 other upstream 2260789 8442132 ~ 8472989 (+)
fasn fasn other upstream 2294913 8386173 ~ 8438865 (+)
G35021 NA other upstream 3829781 6902417 ~ 6903997 (+)
dock1 dock1,LOC107740868 other downstream 13630 10747637 ~ 11001805 (+)
G35903 NA other downstream 1067451 11801458 ~ 11802204 (+)
bnip3 bnip3,LOC107553688,LOC107653114,LOC107582186,LOC107706607 other downstream 1377683 12111690 ~ 12566941 (+)
G35967 NA other downstream 1632533 12366540 ~ 12370962 (+)
G35995 NA other downstream 1968298 12702305 ~ 12703056 (+)

Expression


Co-expression Network