Gene
RNA
| Item | Value |
|---|---|
| gene id | G35810 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 10847887 ~ 10848371 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU48176 | True | 425 | lncRNA | 0.42 | 2 | 10847887 | 10848371 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trim65 | trim65 | coding | upstream | 362089 | 10476390 ~ 10485798 (+) |
| LOC103039374 | NA | coding | upstream | 405949 | 10437323 ~ 10441938 (+) |
| cdc42ep4 | NA | coding | upstream | 423642 | 10385012 ~ 10424245 (+) |
| LOC103040920 | sdk2,sdk2b | coding | upstream | 474546 | 9829485 ~ 10373341 (+) |
| LOC103043335 | npffr1 | coding | upstream | 1580291 | 9220731 ~ 9267596 (+) |
| foxi2 | foxi2 | coding | downstream | 192327 | 11040698 ~ 11042893 (+) |
| ptpre | ptpre,LOC103359937,LOC107387775 | coding | downstream | 336519 | 11184890 ~ 11217372 (+) |
| glrx3 | glrx3,LOC107745700 | coding | downstream | 1224992 | 12073363 ~ 12094731 (+) |
| jakmip3 | jakmip3 | coding | downstream | 1755586 | 12603957 ~ 12664928 (+) |
| dpysl4 | dpysl4,LOC107653119,LOC107706606,LOC107582189,LOC107654562,LOC107568139 | coding | downstream | 1823174 | 12671545 ~ 12692068 (+) |
| G35794 | NA | non-coding | upstream | 113880 | 10733778 ~ 10734007 (+) |
| G35748 | NA | non-coding | upstream | 359834 | 10487115 ~ 10488053 (+) |
| G35677 | NA | non-coding | upstream | 764799 | 10081497 ~ 10083088 (+) |
| G35645 | NA | non-coding | upstream | 888020 | 9959325 ~ 9959867 (+) |
| G35621 | NA | non-coding | upstream | 1013171 | 9833163 ~ 9834716 (+) |
| G35825 | NA | non-coding | downstream | 230501 | 11078872 ~ 11079443 (+) |
| LOC103033033 | NA | non-coding | downstream | 241921 | 11090292 ~ 11264386 (+) |
| G35832 | NA | non-coding | downstream | 266278 | 11114649 ~ 11200184 (+) |
| G35833 | NA | non-coding | downstream | 305528 | 11153899 ~ 11159812 (+) |
| G35834 | NA | non-coding | downstream | 308005 | 11156376 ~ 11264980 (+) |
| G35744 | mrpl38 | other | upstream | 372104 | 10471380 ~ 10475783 (+) |
| LOC103024481 | adamts14,LOC103367006 | other | upstream | 1996495 | 8719354 ~ 8851392 (+) |
| LOC103037241 | wac,waca,LOC107738973,LOC107665881,LOC107749376 | other | upstream | 2374898 | 8442132 ~ 8472989 (+) |
| fasn | fasn | other | upstream | 2409022 | 8386173 ~ 8438865 (+) |
| G35021 | NA | other | upstream | 3943890 | 6902417 ~ 6903997 (+) |
| G35903 | NA | other | downstream | 953087 | 11801458 ~ 11802204 (+) |
| bnip3 | bnip3,LOC107553688,LOC107653114,LOC107582186,LOC107706607 | other | downstream | 1263319 | 12111690 ~ 12566941 (+) |
| G35967 | NA | other | downstream | 1518169 | 12366540 ~ 12370962 (+) |
| G35995 | NA | other | downstream | 1853934 | 12702305 ~ 12703056 (+) |
| LOC103039668 | LOC108435045 | other | downstream | 2653875 | 13502246 ~ 13520702 (+) |
