G35825


Basic Information

Item Value
gene id G35825
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 11078872 ~ 11079443 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU48192
gaccgaacaggagacggagactggacagggaacggagactgggactggacagggggttcagactgaacaaacgactggactggggactgagactggacagggaacagaacacagggctgagactggacacggggctgagactggacagggggCTGGacaaaactggacaggggaactgGAACCATAACAGTGACGGGGACAGAAACAAATACAGTGACTGGGACGGGAACAGAaaaaccaccggggacaggaactggaactGACACAGATACGGGGACCAGgatagggagagacaggggtacAAACAttggtgggtgcccaggactggcaaaagtctgtagggaagtccaaggagccagcctgggcacagttctggggGCAAAGACAGGGGGCCTTGGGGCAGGCCTGGGGGTATACAAAGTTCGAGGAGCAGATAcaggagcagcgggagctggagctgaggctgaggccggggcagcgggagctgcaggagctgaggctgaggccggagcagcggg

Function

NR:

description
PREDICTED: teneurin-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48192 True 518 lncRNA 0.60 2 11078872 11079443

Neighbor

gene id symbol gene type direction distance location
foxi2 foxi2 coding upstream 35979 11040698 ~ 11042893 (+)
trim65 trim65 coding upstream 593074 10476390 ~ 10485798 (+)
LOC103039374 NA coding upstream 636934 10437323 ~ 10441938 (+)
cdc42ep4 NA coding upstream 654627 10385012 ~ 10424245 (+)
LOC103040920 sdk2,sdk2b coding upstream 705531 9829485 ~ 10373341 (+)
ptpre ptpre,LOC103359937,LOC107387775 coding downstream 105447 11184890 ~ 11217372 (+)
glrx3 glrx3,LOC107745700 coding downstream 993920 12073363 ~ 12094731 (+)
jakmip3 jakmip3 coding downstream 1524514 12603957 ~ 12664928 (+)
dpysl4 dpysl4,LOC107653119,LOC107706606,LOC107582189,LOC107654562,LOC107568139 coding downstream 1592102 12671545 ~ 12692068 (+)
LOC103039392 chmp6b,chmp6,LOC108429718,LOC107749864,LOC107684156,LOC107755461,LOC107690936 coding downstream 1624895 12704338 ~ 12710368 (+)
G35810 NA non-coding upstream 230501 10847887 ~ 10848371 (+)
G35794 NA non-coding upstream 344865 10733778 ~ 10734007 (+)
G35748 NA non-coding upstream 590819 10487115 ~ 10488053 (+)
G35677 NA non-coding upstream 995784 10081497 ~ 10083088 (+)
G35645 NA non-coding upstream 1119005 9959325 ~ 9959867 (+)
LOC103033033 NA non-coding downstream 10849 11090292 ~ 11264386 (+)
G35832 NA non-coding downstream 35206 11114649 ~ 11200184 (+)
G35833 NA non-coding downstream 74456 11153899 ~ 11159812 (+)
G35834 NA non-coding downstream 76933 11156376 ~ 11264980 (+)
LOC111192404 NA non-coding downstream 360969 11440412 ~ 11442668 (+)
dock1 dock1,LOC107740868 other upstream 77067 10747637 ~ 11001805 (+)
G35744 mrpl38 other upstream 603089 10471380 ~ 10475783 (+)
LOC103024481 adamts14,LOC103367006 other upstream 2227480 8719354 ~ 8851392 (+)
LOC103037241 wac,waca,LOC107738973,LOC107665881,LOC107749376 other upstream 2605883 8442132 ~ 8472989 (+)
fasn fasn other upstream 2640007 8386173 ~ 8438865 (+)
G35903 NA other downstream 722015 11801458 ~ 11802204 (+)
bnip3 bnip3,LOC107553688,LOC107653114,LOC107582186,LOC107706607 other downstream 1032247 12111690 ~ 12566941 (+)
G35967 NA other downstream 1287097 12366540 ~ 12370962 (+)
G35995 NA other downstream 1622862 12702305 ~ 12703056 (+)
LOC103039668 LOC108435045 other downstream 2422803 13502246 ~ 13520702 (+)

Expression


Co-expression Network