G35903


Basic Information

Item Value
gene id G35903
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 11801458 ~ 11802204 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU48301
tgtgaggaacactctgcgcagagtcaacccacgaaaagctgcaggaccagacaacatccccggcagagtgctcagggagtgcgcagaccagctgacagatgttctcacggacatcttcaacatctccctgtgcagcgccactgtcccaacgtgcctcaagtccaccaccatcgtccccgtgccgaagaagtccacagtgtcctgcctcaatgactaccgtcccgttgcacttacacccatcatcatgaagtgcttcgagaggctagtcatgaggaacatcaagacacaactgccctcttcactggaccccctgcagtttgcgtatcgtcccaatcgctccacggacgatgccatcaccaccacccttcatctctccctcacccacctggagaagaaggacacttacgtcagaatgctgtttatagacttcagttcagcattcaacaccatcatcccacagaacctcaccaggaagctaagctcgctcggcctcaacacccccctctgcaactggatcctggactttctgacggggagaccccagtcagtccggttcgggggcagcacctccagcaccatcacactgaacacgggggccccccagggcagtgtcctgagtcctctgctgttcaccctgctgactcatgactgtgctgcaaaacacagttctaacagctttatcaagttcgccgatgatacaaccatgctgggtctcatcaccaaaggcgacgagtcagcatacagaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48301 True 747 TUCP 0.56 1 11801458 11802204

Neighbor

gene id symbol gene type direction distance location
ptpre ptpre,LOC103359937,LOC107387775 coding upstream 584086 11184890 ~ 11217372 (+)
foxi2 foxi2 coding upstream 758565 11040698 ~ 11042893 (+)
trim65 trim65 coding upstream 1315660 10476390 ~ 10485798 (+)
LOC103039374 NA coding upstream 1359520 10437323 ~ 10441938 (+)
cdc42ep4 NA coding upstream 1377213 10385012 ~ 10424245 (+)
glrx3 glrx3,LOC107745700 coding downstream 271159 12073363 ~ 12094731 (+)
jakmip3 jakmip3 coding downstream 801753 12603957 ~ 12664928 (+)
dpysl4 dpysl4,LOC107653119,LOC107706606,LOC107582189,LOC107654562,LOC107568139 coding downstream 869341 12671545 ~ 12692068 (+)
LOC103039392 chmp6b,chmp6,LOC108429718,LOC107749864,LOC107684156,LOC107755461,LOC107690936 coding downstream 902134 12704338 ~ 12710368 (+)
LOC103024023 LOC108273716,LOC108429130,LOC107690938 coding downstream 915449 12717653 ~ 12831319 (+)
LOC111192404 NA non-coding upstream 358790 11440412 ~ 11442668 (+)
G35834 NA non-coding upstream 536478 11156376 ~ 11264980 (+)
LOC103033033 NA non-coding upstream 537072 11090292 ~ 11264386 (+)
G35832 NA non-coding upstream 601274 11114649 ~ 11200184 (+)
G35833 NA non-coding upstream 641646 11153899 ~ 11159812 (+)
G35908 NA non-coding downstream 19688 11821892 ~ 11822308 (+)
G35912 NA non-coding downstream 47328 11849532 ~ 11849748 (+)
G35913 NA non-coding downstream 48920 11851124 ~ 11851340 (+)
G35931 NA non-coding downstream 267991 12070195 ~ 12072400 (+)
G35971 NA non-coding downstream 657570 12459774 ~ 12461856 (+)
dock1 dock1,LOC107740868 other upstream 799653 10747637 ~ 11001805 (+)
G35744 mrpl38 other upstream 1325675 10471380 ~ 10475783 (+)
LOC103024481 adamts14,LOC103367006 other upstream 2950066 8719354 ~ 8851392 (+)
LOC103037241 wac,waca,LOC107738973,LOC107665881,LOC107749376 other upstream 3328469 8442132 ~ 8472989 (+)
fasn fasn other upstream 3362593 8386173 ~ 8438865 (+)
bnip3 bnip3,LOC107553688,LOC107653114,LOC107582186,LOC107706607 other downstream 309486 12111690 ~ 12566941 (+)
G35967 NA other downstream 564336 12366540 ~ 12370962 (+)
G35995 NA other downstream 900101 12702305 ~ 12703056 (+)
LOC103039668 LOC108435045 other downstream 1700042 13502246 ~ 13520702 (+)
G36371 NA other downstream 2660933 14463137 ~ 14463639 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G101383 NA non-coding NC_047600.1 CM018546.1 18525485 ~ 18528714 (-)