G35967


Basic Information

Item Value
gene id G35967
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 12366540 ~ 12370962 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU48418
CAGGAGTACTGTCAGTTGGGGTTCAGACTAGAGCTGGGAGACGCAGTATCTGGACTTACGAGTGAAACTTGCAGTTACTCAGGACGAGCAGCTTTAGTGAGGAATGTCTTTTTTCAGTGCGCCTAAACTGAATCAGGCCGAGCTCCAGCTGGAGAGAGcTCCTCCCACGGTATGGATCATAGGGGACAGCTATATTCGCCGTGGGGAGGAGATAGCGAGGAGCTCACTGGGAGGTGACCTGGGACTGCAGGCCGAGGTCAGCTGGTTCGGGTGGGGGGGACTGAGGTGGCGAGACCTCGTCCCGTTCTTTAACCATTCCCTGAGAGGAAGAACGGCTCCGGACGTGCTGATCGTCCACTGTGGCGGGAACGACCTCGGAGGGATGAACCCGTTCATCTCAGCGCAGAGATGAAGGGGGATCTGATTGATCTCCACCGTCGTTTCCCACACATGAAGCTCCTGCTGTCAGATATCACCCCCCGCCGTCAGTGGAGGTCCACCACTCACCCAAGAAGATCGACGCGGCCCGGAAACGGGTGAACCGCGAGATGTGCGATTTCATCTTGGGAGTGGAGGGGGGTGTTATTCATCACCCGGACATCGTGTTCCACGACCCTCGGCTCTTCCTCAGAGACCGGGTTCACCTGTCCCCTTTGGGGaacaaactgtttttacatGACATCGCAGAATCCCTGAAAACCTTTATCTAATAAAAGTGATTCTGCTGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48418 True 730 TUCP 0.55 3 12366540 12370962

Neighbor

gene id symbol gene type direction distance location
glrx3 glrx3,LOC107745700 coding upstream 271809 12073363 ~ 12094731 (+)
ptpre ptpre,LOC103359937,LOC107387775 coding upstream 1149168 11184890 ~ 11217372 (+)
foxi2 foxi2 coding upstream 1323647 11040698 ~ 11042893 (+)
trim65 trim65 coding upstream 1880742 10476390 ~ 10485798 (+)
LOC103039374 NA coding upstream 1924602 10437323 ~ 10441938 (+)
jakmip3 jakmip3 coding downstream 232995 12603957 ~ 12664928 (+)
dpysl4 dpysl4,LOC107653119,LOC107706606,LOC107582189,LOC107654562,LOC107568139 coding downstream 300583 12671545 ~ 12692068 (+)
LOC103039392 chmp6b,chmp6,LOC108429718,LOC107749864,LOC107684156,LOC107755461,LOC107690936 coding downstream 333376 12704338 ~ 12710368 (+)
LOC103024023 LOC108273716,LOC108429130,LOC107690938 coding downstream 346691 12717653 ~ 12831319 (+)
tekt3 tekt3,LOC107753251,LOC107684491 coding downstream 593820 12964782 ~ 12976020 (+)
G35931 NA non-coding upstream 294140 12070195 ~ 12072400 (+)
G35913 NA non-coding upstream 515200 11851124 ~ 11851340 (+)
G35912 NA non-coding upstream 516792 11849532 ~ 11849748 (+)
G35908 NA non-coding upstream 544232 11821892 ~ 11822308 (+)
LOC111192404 NA non-coding upstream 923872 11440412 ~ 11442668 (+)
G35971 NA non-coding downstream 88812 12459774 ~ 12461856 (+)
G35977 NA non-coding downstream 198216 12569178 ~ 12569580 (+)
G35973 NA non-coding downstream 199151 12570113 ~ 12572345 (+)
G35974 NA non-coding downstream 202953 12573915 ~ 12575448 (+)
G35984 ppp2r2d,LOC105009682,LOC107553689 non-coding downstream 215936 12586898 ~ 12602796 (+)
G35903 NA other upstream 564336 11801458 ~ 11802204 (+)
dock1 dock1,LOC107740868 other upstream 1364735 10747637 ~ 11001805 (+)
G35744 mrpl38 other upstream 1890757 10471380 ~ 10475783 (+)
LOC103024481 adamts14,LOC103367006 other upstream 3515148 8719354 ~ 8851392 (+)
LOC103037241 wac,waca,LOC107738973,LOC107665881,LOC107749376 other upstream 3893551 8442132 ~ 8472989 (+)
G35995 NA other downstream 331343 12702305 ~ 12703056 (+)
LOC103039668 LOC108435045 other downstream 1131284 13502246 ~ 13520702 (+)
G36371 NA other downstream 2092175 14463137 ~ 14463639 (+)
LOC107197918 NA other downstream 2193963 14564925 ~ 14567912 (+)
G36439 LOC103041415 other downstream 2418418 14789380 ~ 14790833 (+)

Expression


Co-expression Network