G35992


Basic Information

Item Value
gene id G35992
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 12696949 ~ 12697208 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU48465
ctggttttagagcacaataattgattgtggtgatggacagttctggtggaaacaggagagttgaggtgcacattgaattctgcgtgatttgatcagccgtggttttatgttttttggatacaatctgggttagcacccgaacatccctttcagacagcttcctcttacagcgtccacagttaatcctgttggatatggttggtccttcttggtggtatgctgacattaccctggataccgtggctcttgatgcatcacaa

Function

GO:

id name namespace
GO:0019208 phosphatase regulator activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48465 True 260 lncRNA 0.45 1 12696949 12697208

Neighbor

gene id symbol gene type direction distance location
dpysl4 dpysl4,LOC107653119,LOC107706606,LOC107582189,LOC107654562,LOC107568139 coding upstream 4881 12671545 ~ 12692068 (+)
jakmip3 jakmip3 coding upstream 32021 12603957 ~ 12664928 (+)
glrx3 glrx3,LOC107745700 coding upstream 602218 12073363 ~ 12094731 (+)
ptpre ptpre,LOC103359937,LOC107387775 coding upstream 1479577 11184890 ~ 11217372 (+)
foxi2 foxi2 coding upstream 1654056 11040698 ~ 11042893 (+)
LOC103039392 chmp6b,chmp6,LOC108429718,LOC107749864,LOC107684156,LOC107755461,LOC107690936 coding downstream 7130 12704338 ~ 12710368 (+)
LOC103024023 LOC108273716,LOC108429130,LOC107690938 coding downstream 20445 12717653 ~ 12831319 (+)
tekt3 tekt3,LOC107753251,LOC107684491 coding downstream 267574 12964782 ~ 12976020 (+)
pmp22 pmp22,LOC107684480 coding downstream 293935 12991143 ~ 13009673 (+)
psme2 psme2,LOC107653260,LOC107716467,LOC107556770,LOC107674582,LOC107551845,LOC107727955 coding downstream 600340 13297548 ~ 13305858 (+)
G35972 NA non-coding upstream 1333 12694830 ~ 12695616 (+)
G35991 NA non-coding upstream 18452 12678247 ~ 12678497 (+)
G35990 NA non-coding upstream 26801 12669922 ~ 12670148 (+)
G35984 ppp2r2d,LOC105009682,LOC107553689 non-coding upstream 94153 12586898 ~ 12602796 (+)
G35974 NA non-coding upstream 121501 12573915 ~ 12575448 (+)
G36004 NA non-coding downstream 75780 12772988 ~ 12794204 (+)
G36011 NA non-coding downstream 138071 12835279 ~ 12837320 (+)
G36106 NA non-coding downstream 257203 12954411 ~ 12954711 (+)
G36129 NA non-coding downstream 519576 13216784 ~ 13278356 (+)
G36146 NA non-coding downstream 609885 13307093 ~ 13311608 (+)
bnip3 bnip3,LOC107553688,LOC107653114,LOC107582186,LOC107706607 other upstream 130008 12111690 ~ 12566941 (+)
G35967 NA other upstream 325987 12366540 ~ 12370962 (+)
G35903 NA other upstream 894745 11801458 ~ 11802204 (+)
dock1 dock1,LOC107740868 other upstream 1695144 10747637 ~ 11001805 (+)
G35744 mrpl38 other upstream 2221166 10471380 ~ 10475783 (+)
G35995 NA other downstream 5097 12702305 ~ 12703056 (+)
LOC103039668 LOC108435045 other downstream 805038 13502246 ~ 13520702 (+)
G36371 NA other downstream 1765929 14463137 ~ 14463639 (+)
LOC107197918 NA other downstream 1867717 14564925 ~ 14567912 (+)
G36439 LOC103041415 other downstream 2092172 14789380 ~ 14790833 (+)

Expression


Co-expression Network