G35995


Basic Information

Item Value
gene id G35995
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 12702305 ~ 12703056 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU48468
CTTACACTCCTCAGCAGCCTCCTCCGTGCTGCTACAGGTGTGATCCTCATGCTCTTCCTCCTGACACTGACCACAGATCagctcctcatcctcctcacaGAACAGAGTCAGCCTCTCTCCATGCCTGGCGCACATCCTGCCATCCTTGGCCTGGTCTGTGCCCTCCGCGCTGTCCACCAGACCCAGCTCCGCCCCCGTGGCGACCCTCCGAGTCTGATCCTGAAACAGCGAGTCGAACAGGCCTTTCAGAACCCCGTCCAGCAGCTCTCGCCCGTAACACTCCGTACATCCCTGCTGGTCCTGCCCTAACTCCAGCTGACAGAGCTCTAAACAGGACTGGCACAGGCTGTGCCCACAGGGCAGCAGCAGGGACCCCTCTGCCTGGCATCCCGGGCACACAGGGTCTCCTGAGGGTAAAGACGGCTGCTCTGAGGACATGGTGCTGATCAGTTATAATAAGGGTCTGATTCTGCTTTTGAGgccttctcttctctcctttctcttctcttctcttctcttctctggtCTCTTCGCTTCTCTTTTCTTTGCTTCgcttgtcttctcttctcttcccttttcttctcttttcttctcttctctttgcttctcttctcttctctttgcttctcttctcttctcttctcttattcCTGCCTTGTGCTCTCTGCTATGGTGACCTATCAAAATCCCCCCTGAATAACTGATGATCTATTTATAATGTAGTTATTTGTG

Function

GO: NA

KEGG:

id description
ko00010 Glycolysis / Gluconeogenesis
ko00030 Pentose phosphate pathway
ko00051 Fructose and mannose metabolism
ko00500 Starch and sucrose metabolism
ko00710 Carbon fixation in photosynthetic organisms
ko00680 Methane metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU48468 True 732 TUCP 0.53 2 12702305 12703056

Neighbor

gene id symbol gene type direction distance location
dpysl4 dpysl4,LOC107653119,LOC107706606,LOC107582189,LOC107654562,LOC107568139 coding upstream 10237 12671545 ~ 12692068 (+)
jakmip3 jakmip3 coding upstream 37377 12603957 ~ 12664928 (+)
glrx3 glrx3,LOC107745700 coding upstream 607574 12073363 ~ 12094731 (+)
ptpre ptpre,LOC103359937,LOC107387775 coding upstream 1484933 11184890 ~ 11217372 (+)
foxi2 foxi2 coding upstream 1659412 11040698 ~ 11042893 (+)
LOC103039392 chmp6b,chmp6,LOC108429718,LOC107749864,LOC107684156,LOC107755461,LOC107690936 coding downstream 1282 12704338 ~ 12710368 (+)
LOC103024023 LOC108273716,LOC108429130,LOC107690938 coding downstream 14597 12717653 ~ 12831319 (+)
tekt3 tekt3,LOC107753251,LOC107684491 coding downstream 261726 12964782 ~ 12976020 (+)
pmp22 pmp22,LOC107684480 coding downstream 288087 12991143 ~ 13009673 (+)
psme2 psme2,LOC107653260,LOC107716467,LOC107556770,LOC107674582,LOC107551845,LOC107727955 coding downstream 594492 13297548 ~ 13305858 (+)
G35992 NA non-coding upstream 5097 12696949 ~ 12697208 (+)
G35972 NA non-coding upstream 6689 12694830 ~ 12695616 (+)
G35991 NA non-coding upstream 23808 12678247 ~ 12678497 (+)
G35990 NA non-coding upstream 32157 12669922 ~ 12670148 (+)
G35984 ppp2r2d,LOC105009682,LOC107553689 non-coding upstream 99509 12586898 ~ 12602796 (+)
G36004 NA non-coding downstream 69932 12772988 ~ 12794204 (+)
G36011 NA non-coding downstream 132223 12835279 ~ 12837320 (+)
G36106 NA non-coding downstream 251355 12954411 ~ 12954711 (+)
G36129 NA non-coding downstream 513728 13216784 ~ 13278356 (+)
G36146 NA non-coding downstream 604037 13307093 ~ 13311608 (+)
bnip3 bnip3,LOC107553688,LOC107653114,LOC107582186,LOC107706607 other upstream 135364 12111690 ~ 12566941 (+)
G35967 NA other upstream 331343 12366540 ~ 12370962 (+)
G35903 NA other upstream 900101 11801458 ~ 11802204 (+)
dock1 dock1,LOC107740868 other upstream 1700500 10747637 ~ 11001805 (+)
G35744 mrpl38 other upstream 2226522 10471380 ~ 10475783 (+)
LOC103039668 LOC108435045 other downstream 799190 13502246 ~ 13520702 (+)
G36371 NA other downstream 1760081 14463137 ~ 14463639 (+)
LOC107197918 NA other downstream 1861869 14564925 ~ 14567912 (+)
G36439 LOC103041415 other downstream 2086324 14789380 ~ 14790833 (+)
LOC103028998 pyyb,LOC103028998,LOC108410797,LOC107745683,LOC107569181,LOC107684781,LOC107695522,LOC107753323,LOC107560546 other downstream 2729773 15432829 ~ 15440157 (+)

Expression


Co-expression Network