G36061


Basic Information

Item Value
gene id G36061
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 12604995 ~ 12605356 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU48551
tattttaagaCTAAAAAACATGGCACTgtctttggacttgataaaacacagtggatcaacaccagcagatgacatgtctctccaaaccatcactgatcatcagtaaattttacatttcatttgtaaatcaggggatcagagtctggaggaagagtggagagacacacagtccaaactgctcaaggtctagtgttaagtttccaccaatcagtgatggtttggagaaacatgtcatctgctggtgttgatccactgtgttttattatcaagtctaaagtcttgttttgttttcccacaaaatcttacagcactttatactGCCTTacctttgctgacaacttttatgggtatgcagatttcat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48551 True 362 lncRNA 0.38 1 12604995 12605356

Neighbor

gene id symbol gene type direction distance location
ppp2r2d ppp2r2d,LOC107553689,LOC105009682 coding downstream 1615 12575511 ~ 12603380 (-)
tcerg1l tcerg1l coding downstream 187725 12243281 ~ 12417270 (-)
ebf3 ebf3,ebf3a,LOC107582179,LOC107745698 coding downstream 566413 11897053 ~ 12038582 (-)
fam196a fam196a coding downstream 1724161 10827410 ~ 10880834 (-)
wbp2 wbp2,LOC107667802,LOC107578800 coding downstream 2110809 10487067 ~ 10494186 (-)
trnaq-cug_2 NA coding upstream 62480 12667836 ~ 12667907 (-)
trnaq-uug NA coding upstream 63360 12668716 ~ 12668787 (-)
LOC103039695 LOC108429709 coding upstream 93232 12698588 ~ 12702831 (-)
LOC103038875 NA coding upstream 231812 12837168 ~ 12914367 (-)
LOC103038558 NA coding upstream 320877 12926233 ~ 12928968 (-)
G36047 NA non-coding downstream 29544 12574929 ~ 12575451 (-)
G36045 NA non-coding downstream 30153 12573855 ~ 12574842 (-)
G36043 NA non-coding downstream 143141 12459772 ~ 12461854 (-)
G35946 NA non-coding downstream 537608 12050053 ~ 12067387 (-)
G35944 NA non-coding downstream 580419 12020754 ~ 12024576 (-)
G36082 NA non-coding upstream 80670 12686026 ~ 12686397 (-)
G36080 NA non-coding upstream 89470 12694826 ~ 12695659 (-)
G36075 NA non-coding upstream 98996 12704352 ~ 12706177 (-)
G36100 NA non-coding upstream 225986 12831342 ~ 12832622 (-)
G36093 NA non-coding upstream 229278 12834634 ~ 12849471 (-)
LOC103036331 NA other downstream 532568 12067533 ~ 12072427 (-)
clrn3 NA other downstream 1521813 11053659 ~ 11083182 (-)
rpl38 NA other downstream 3173767 9426075 ~ 9431228 (-)
G35512 NA other downstream 3399084 9204570 ~ 9205911 (-)
tbata NA other downstream 3601099 8938933 ~ 9003896 (-)
G36074 NA other upstream 104452 12709808 ~ 12711545 (-)
lsm5 lsm5,LOC107653262,LOC107727957,LOC107674592 other upstream 701732 13307088 ~ 13311525 (-)
p4ha1 p4ha1,p4ha1a,LOC107753313,LOC108273903,LOC107560551,LOC107684765 other upstream 869810 13475166 ~ 13500177 (-)
c4h10orf88 LOC103041415 other upstream 2180596 14785952 ~ 14797212 (-)
G36677 NA other upstream 3142044 15747400 ~ 15774593 (-)

Expression


Co-expression Network