G36093


Basic Information

Item Value
gene id G36093
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 12834634 ~ 12849471 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU48588
cctttttttaatcacagtttttttatgcatcttggcatcatgttctcctccaccagtcttacacactgcttttggataactttatgctgctttactcctggtgcaaaaattcaagcagttcagtttgatggtttgtgatcatccatcttcctcttgattatgttccagaggttttaaattaggtaaaatcaaagaaactcatcagttttaggtgctctcttatttttttccacagctgtatatatatatatatatagaaaggcAGGGTGATGATAGAAGGAAACGACGTATGAAGATCCTCATAAAAATCTGTTCCTCTTGTGTGTCACGAGATCAGTGACTTtacacaaagaaaataaaatcattgtttgacgtct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48588 True 377 lncRNA 0.35 2 12834634 12849471

Neighbor

gene id symbol gene type direction distance location
LOC103039695 LOC108429709 coding downstream 131803 12698588 ~ 12702831 (-)
trnaq-uug NA coding downstream 165847 12668716 ~ 12668787 (-)
trnaq-cug_2 NA coding downstream 166727 12667836 ~ 12667907 (-)
ppp2r2d ppp2r2d,LOC107553689,LOC105009682 coding downstream 231254 12575511 ~ 12603380 (-)
tcerg1l tcerg1l coding downstream 417364 12243281 ~ 12417270 (-)
LOC103038558 NA coding upstream 76762 12926233 ~ 12928968 (-)
trnam-cau_19 NA coding upstream 348231 13197702 ~ 13197775 (-)
trnam-cau_20 NA coding upstream 350695 13200166 ~ 13200238 (-)
LOC111192419 NA coding upstream 358123 13207594 ~ 13209507 (-)
LOC103042955 LOC108431373,LOC106578596,LOC103365861,LOC106590056 coding upstream 404977 13254448 ~ 13260826 (-)
G36100 NA non-coding downstream 2012 12831342 ~ 12832622 (-)
G36075 NA non-coding downstream 128457 12704352 ~ 12706177 (-)
G36080 NA non-coding downstream 138975 12694826 ~ 12695659 (-)
G36082 NA non-coding downstream 148237 12686026 ~ 12686397 (-)
G36061 NA non-coding downstream 229278 12604995 ~ 12605356 (-)
G36104 NA non-coding upstream 81354 12930825 ~ 12945228 (-)
G36115 NA non-coding upstream 104852 12954323 ~ 12954745 (-)
G36122 NA non-coding upstream 141603 12991074 ~ 12991421 (-)
G36123 NA non-coding upstream 145103 12994574 ~ 12994887 (-)
G36124 NA non-coding upstream 152260 13001731 ~ 13002019 (-)
G36074 NA other downstream 123089 12709808 ~ 12711545 (-)
LOC103036331 NA other downstream 762207 12067533 ~ 12072427 (-)
clrn3 NA other downstream 1751452 11053659 ~ 11083182 (-)
rpl38 NA other downstream 3403406 9426075 ~ 9431228 (-)
G35512 NA other downstream 3628723 9204570 ~ 9205911 (-)
lsm5 lsm5,LOC107653262,LOC107727957,LOC107674592 other upstream 457617 13307088 ~ 13311525 (-)
p4ha1 p4ha1,p4ha1a,LOC107753313,LOC108273903,LOC107560551,LOC107684765 other upstream 625695 13475166 ~ 13500177 (-)
c4h10orf88 LOC103041415 other upstream 1936481 14785952 ~ 14797212 (-)
G36677 NA other upstream 2897929 15747400 ~ 15774593 (-)
LOC103023526 ndua4,ndufa4,LOC103023526,LOC108443163,LOC107745684,LOC107684782,LOC107569184 other upstream 2987634 15837105 ~ 15840516 (-)

Expression


Co-expression Network