G36100


Basic Information

Item Value
gene id G36100
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 12831342 ~ 12832622 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU48595
aactcttggtcttcctttcctttcctgatgagtgacagtttcatcattttaaggtttcaaagttttttccaactgtacttgaggatactttcaaagtttttagaccttttctttacttagttgagtattttttctcataatctggattagaacattactcaaatactcactattcactgtatacctgtaactctacctcttcactactttactttaactgatgctctcaaactttaacattaagagacaagaaattcaagtaattaactcttgatgagttcagcacagctgttaactgaaagcctgaattccaggtgactctacctcataaagctgactgagaaaatctaaaatataaaacacttttttattattattattattattattattattatttatatatattttagatgtttttcttcatagtttgagctgtgtccaaacttttgactggtactgtataaagtGATAAAGCCAGGAAAATTCGATTTCTACATAATGAATGGTCAAATCCAatcaaaatattacattttgagGGCCAAAAGACATAATATTTTGATAATGACCCTTACATCATATTATATCCCTAGTTTCATAAATCATAATGACATTCTGCTACATTTCTTCAAGCTTATTCAAGATCTAAGAGCACCGCAGTTGTGATTGTGCGTCTCTGATCTGTAAGAATGGTGACATTAGATCACTATGATAAGAAAAGTGATACTGAGGTCTcagtacagcagcagcagcagcggctaaATCTAGATAAGCCTTGTGTTTAggaaaatacacaaaaagataaaaacatgaTCTGATCTGCTGACATAAAGTTTAGAAGGCCTTTTTCTGTACTcacatgaaaaatgtgatttttttttacatttaggttCATTGAAGTTACAGAAAATTGTCTTATTCATTCAGTTCCCATGTTCTGAAGAGTTACTGTTGCTGGTTGGACAAGCTTTTCTCAGTTTCGTTGGCAAAAATACCCTTTTTTCTAACAATAAACTGTCGTACACAAACCAATATGTAACCAGAAACtataatttagaattttaaatTCTCAGCTCAAAtctgaaaatggaaaaaactTGAAACACTGGTGACCGTTCCCAGGAGGTCTagtgaaattactccaaaagggcatgggaaactcatccaggaggtcccaaaagaacccagaacagcatttaaagaactgcaggttaaggtcagtgttacaGTGTCATTGTTAAAGAGATTAGGGAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48595 True 1256 lncRNA 0.33 2 12831342 12832622

Neighbor

gene id symbol gene type direction distance location
LOC103039695 LOC108429709 coding downstream 128511 12698588 ~ 12702831 (-)
trnaq-uug NA coding downstream 162555 12668716 ~ 12668787 (-)
trnaq-cug_2 NA coding downstream 163435 12667836 ~ 12667907 (-)
ppp2r2d ppp2r2d,LOC107553689,LOC105009682 coding downstream 227962 12575511 ~ 12603380 (-)
tcerg1l tcerg1l coding downstream 414072 12243281 ~ 12417270 (-)
LOC103038875 NA coding upstream 4546 12837168 ~ 12914367 (-)
LOC103038558 NA coding upstream 93611 12926233 ~ 12928968 (-)
trnam-cau_19 NA coding upstream 365080 13197702 ~ 13197775 (-)
trnam-cau_20 NA coding upstream 367544 13200166 ~ 13200238 (-)
LOC111192419 NA coding upstream 374972 13207594 ~ 13209507 (-)
G36075 NA non-coding downstream 125165 12704352 ~ 12706177 (-)
G36080 NA non-coding downstream 135683 12694826 ~ 12695659 (-)
G36082 NA non-coding downstream 144945 12686026 ~ 12686397 (-)
G36061 NA non-coding downstream 225986 12604995 ~ 12605356 (-)
G36047 NA non-coding downstream 255891 12574929 ~ 12575451 (-)
G36093 NA non-coding upstream 2012 12834634 ~ 12849471 (-)
G36104 NA non-coding upstream 98203 12930825 ~ 12945228 (-)
G36115 NA non-coding upstream 121701 12954323 ~ 12954745 (-)
G36122 NA non-coding upstream 158452 12991074 ~ 12991421 (-)
G36123 NA non-coding upstream 161952 12994574 ~ 12994887 (-)
G36074 NA other downstream 119797 12709808 ~ 12711545 (-)
LOC103036331 NA other downstream 758915 12067533 ~ 12072427 (-)
clrn3 NA other downstream 1748160 11053659 ~ 11083182 (-)
rpl38 NA other downstream 3400114 9426075 ~ 9431228 (-)
G35512 NA other downstream 3625431 9204570 ~ 9205911 (-)
lsm5 lsm5,LOC107653262,LOC107727957,LOC107674592 other upstream 474466 13307088 ~ 13311525 (-)
p4ha1 p4ha1,p4ha1a,LOC107753313,LOC108273903,LOC107560551,LOC107684765 other upstream 642544 13475166 ~ 13500177 (-)
c4h10orf88 LOC103041415 other upstream 1953330 14785952 ~ 14797212 (-)
G36677 NA other upstream 2914778 15747400 ~ 15774593 (-)
LOC103023526 ndua4,ndufa4,LOC103023526,LOC108443163,LOC107745684,LOC107684782,LOC107569184 other upstream 3004483 15837105 ~ 15840516 (-)

Expression


Co-expression Network