G36104


Basic Information

Item Value
gene id G36104
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 12930825 ~ 12945228 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU48601
gagtaaagcagcataaagttatccaaaagcagtgtgttagactggtggaggagaacatgatgccaagatgcatgaaaactgtgattaaaaaccaaccagggttattccaccaaatattgatttctgaactctttaaactttatgaatatgaacttgttgttttctttgcattatttgaggtctgaaagctctgcatcttttttgttatttcagccatttctcattttctgcaaataaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48601 True 239 lncRNA 0.34 2 12930825 12945228

Neighbor

gene id symbol gene type direction distance location
LOC103038558 NA coding downstream 1857 12926233 ~ 12928968 (-)
LOC103038875 NA coding downstream 16458 12837168 ~ 12914367 (-)
LOC103039695 LOC108429709 coding downstream 227994 12698588 ~ 12702831 (-)
trnaq-uug NA coding downstream 262038 12668716 ~ 12668787 (-)
trnaq-cug_2 NA coding downstream 262918 12667836 ~ 12667907 (-)
trnam-cau_19 NA coding upstream 252474 13197702 ~ 13197775 (-)
trnam-cau_20 NA coding upstream 254938 13200166 ~ 13200238 (-)
LOC111192419 NA coding upstream 262366 13207594 ~ 13209507 (-)
LOC103042955 LOC108431373,LOC106578596,LOC103365861,LOC106590056 coding upstream 309220 13254448 ~ 13260826 (-)
LOC103042649 NA coding upstream 326647 13271875 ~ 13297430 (-)
G36093 NA non-coding downstream 81354 12834634 ~ 12849471 (-)
G36100 NA non-coding downstream 98203 12831342 ~ 12832622 (-)
G36075 NA non-coding downstream 224648 12704352 ~ 12706177 (-)
G36080 NA non-coding downstream 235166 12694826 ~ 12695659 (-)
G36082 NA non-coding downstream 244428 12686026 ~ 12686397 (-)
G36115 NA non-coding upstream 9095 12954323 ~ 12954745 (-)
G36122 NA non-coding upstream 45846 12991074 ~ 12991421 (-)
G36123 NA non-coding upstream 49346 12994574 ~ 12994887 (-)
G36124 NA non-coding upstream 56503 13001731 ~ 13002019 (-)
G36125 NA non-coding upstream 60271 13005499 ~ 13005747 (-)
G36074 NA other downstream 219280 12709808 ~ 12711545 (-)
LOC103036331 NA other downstream 858398 12067533 ~ 12072427 (-)
clrn3 NA other downstream 1847643 11053659 ~ 11083182 (-)
rpl38 NA other downstream 3499597 9426075 ~ 9431228 (-)
G35512 NA other downstream 3724914 9204570 ~ 9205911 (-)
lsm5 lsm5,LOC107653262,LOC107727957,LOC107674592 other upstream 361860 13307088 ~ 13311525 (-)
p4ha1 p4ha1,p4ha1a,LOC107753313,LOC108273903,LOC107560551,LOC107684765 other upstream 529938 13475166 ~ 13500177 (-)
c4h10orf88 LOC103041415 other upstream 1840724 14785952 ~ 14797212 (-)
G36677 NA other upstream 2802172 15747400 ~ 15774593 (-)
LOC103023526 ndua4,ndufa4,LOC103023526,LOC108443163,LOC107745684,LOC107684782,LOC107569184 other upstream 2891877 15837105 ~ 15840516 (-)

Expression


Co-expression Network