G36115


Basic Information

Item Value
gene id G36115
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 12954323 ~ 12954745 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU48614
actgaaacacctggttttagagcacaattatttattgtggtgacggacagttctggtggaaacaggagagttgaggtgcacattgaattctgcgtgatttgatcagccgtggttttatgttttttggatacaatccgggttagcacccgaacatccctttcagacagcttcctcttacagcgtccacagttaatcctgttggatgtggtttgtccttcttggtggtatgctgacattaccctggataccgtggctcttgatgcatcacaaagacttgctgtcttggtcacagatgctccagcaagacatgcaccaacaatttgtcctcttttgaactctggtgtgtccccataatgttgtgtgcattgcaatatttagagcagaactgtgctcttaccctgctaattgaaccttcacactctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48614 True 423 lncRNA 0.45 1 12954323 12954745

Neighbor

gene id symbol gene type direction distance location
LOC103038558 NA coding downstream 25355 12926233 ~ 12928968 (-)
LOC103038875 NA coding downstream 39956 12837168 ~ 12914367 (-)
LOC103039695 LOC108429709 coding downstream 251492 12698588 ~ 12702831 (-)
trnaq-uug NA coding downstream 285536 12668716 ~ 12668787 (-)
trnaq-cug_2 NA coding downstream 286416 12667836 ~ 12667907 (-)
trnam-cau_19 NA coding upstream 242957 13197702 ~ 13197775 (-)
trnam-cau_20 NA coding upstream 245421 13200166 ~ 13200238 (-)
LOC111192419 NA coding upstream 252849 13207594 ~ 13209507 (-)
LOC103042955 LOC108431373,LOC106578596,LOC103365861,LOC106590056 coding upstream 299703 13254448 ~ 13260826 (-)
LOC103042649 NA coding upstream 317130 13271875 ~ 13297430 (-)
G36104 NA non-coding downstream 9095 12930825 ~ 12945228 (-)
G36093 NA non-coding downstream 104852 12834634 ~ 12849471 (-)
G36100 NA non-coding downstream 121701 12831342 ~ 12832622 (-)
G36075 NA non-coding downstream 248146 12704352 ~ 12706177 (-)
G36080 NA non-coding downstream 258664 12694826 ~ 12695659 (-)
G36122 NA non-coding upstream 36329 12991074 ~ 12991421 (-)
G36123 NA non-coding upstream 39829 12994574 ~ 12994887 (-)
G36124 NA non-coding upstream 46986 13001731 ~ 13002019 (-)
G36125 NA non-coding upstream 50754 13005499 ~ 13005747 (-)
G36114 NA non-coding upstream 51771 13006516 ~ 13011012 (-)
G36074 NA other downstream 242778 12709808 ~ 12711545 (-)
LOC103036331 NA other downstream 881896 12067533 ~ 12072427 (-)
clrn3 NA other downstream 1871141 11053659 ~ 11083182 (-)
rpl38 NA other downstream 3523095 9426075 ~ 9431228 (-)
G35512 NA other downstream 3748412 9204570 ~ 9205911 (-)
lsm5 lsm5,LOC107653262,LOC107727957,LOC107674592 other upstream 352343 13307088 ~ 13311525 (-)
p4ha1 p4ha1,p4ha1a,LOC107753313,LOC108273903,LOC107560551,LOC107684765 other upstream 520421 13475166 ~ 13500177 (-)
c4h10orf88 LOC103041415 other upstream 1831207 14785952 ~ 14797212 (-)
G36677 NA other upstream 2792655 15747400 ~ 15774593 (-)
LOC103023526 ndua4,ndufa4,LOC103023526,LOC108443163,LOC107745684,LOC107684782,LOC107569184 other upstream 2882360 15837105 ~ 15840516 (-)

Expression


Co-expression Network