G36477


Basic Information

Item Value
gene id G36477
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 14832969 ~ 14877078 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU49087
aaaaaaaacaaaacaaaaaaaagaaaaatagggaGAAGATCCCGTAAAACGCAGCCACTCAAGCTGCAGGACGCCTCCCCAATCTGGCTGAAGAAGGAGAAAGTTTCTGTTCTGAGTCAGTCCTGAATGCGCTGAGAGCGAGTTTCAGTTTTGGGTTGGGTTGTTGGTTTCTCAGTGATGGTGGAGAAGGGAATAATCTGATTTggtgccttttttatttttttgggatgGTGGAGAAGTCAGGAGGCTAGTTTTGAAAAGGACGACATCGCCTCCAGTTGTAGAGGGACAATTTTCAGTCCAGCTCAATGGGGCTGCTGTTCTCCTGAgcctcctctccctcctcttcTTCACCTGAACCCATTAGACTGTTCAAGAGATTACCTATAATAGGAAAAGAAGCAGAATTACTCAACAattaacaaaacacacaaaaaaaatcatataaaaaaaaagccaagtCTTGTTTGTTGTCTAAAGTTTGCTTCCTTAGTTATGAACTGTAGTCACAAATCTACAAATCTAATAATATAGCTAAGAAGAAATAGATgtgtacattacatttcatttggcagacgcttttgtccaaagcgacttacaatagtcaaatacaaaagtaatagaaggtaaaacatttttagatagggcttaaaggaggttgaAGGGAAGTAAGGAGATAgaaaagtgaaggaggggaagaaggaaatgaggttagaagtagttagtgtgttagaggtgttaagagagtaagtgctctttgaagagctctgtcttcaggagtttcttaaagatagcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU49087 True 796 lncRNA 0.39 2 14832969 14877078

Neighbor

gene id symbol gene type direction distance location
wapl LOC108435041 coding downstream 216347 14565938 ~ 14616622 (-)
grid1 grid1,grid1b,LOC106578986,LOC106589364,LOC103147060 coding downstream 393740 13882457 ~ 14439229 (-)
dnajc9 dnajc9,LOC107684784,LOC107751706 coding downstream 1318731 13508956 ~ 13514238 (-)
LOC103043889 ppp1r9bb,LOC107741705,LOC107684769,LOC107713069,LOC107675672 coding downstream 1412027 13391819 ~ 13420942 (-)
cdh20 cdh20 coding downstream 1447706 13361736 ~ 13385263 (-)
trnal-caa_1 NA coding upstream 74559 14951637 ~ 14951749 (-)
trnal-caa_2 NA coding upstream 74763 14951841 ~ 14951953 (-)
trnal-caa_3 NA coding upstream 75026 14952104 ~ 14952216 (-)
trnal-caa_4 NA coding upstream 75230 14952308 ~ 14952420 (-)
trnal-caa_5 NA coding upstream 75434 14952512 ~ 14952624 (-)
G36428 NA non-coding downstream 54574 14749553 ~ 14778395 (-)
G36417 NA non-coding downstream 127738 14704543 ~ 14705231 (-)
G36396 NA non-coding downstream 262983 14552745 ~ 14569986 (-)
G36339 NA non-coding downstream 802028 13984417 ~ 14030941 (-)
G36331 NA non-coding downstream 983732 13848974 ~ 13849237 (-)
G36542 NA non-coding upstream 271325 15148403 ~ 15149356 (-)
G36550 NA non-coding upstream 322744 15199822 ~ 15200037 (-)
G36632 NA non-coding upstream 505434 15382512 ~ 15454810 (-)
G36629 ki67 non-coding upstream 515933 15393011 ~ 15397037 (-)
G36634 NA non-coding upstream 530382 15407460 ~ 15412008 (-)
c4h10orf88 LOC103041415 other downstream 35757 14785952 ~ 14797212 (-)
p4ha1 p4ha1,p4ha1a,LOC107753313,LOC108273903,LOC107560551,LOC107684765 other downstream 1332792 13475166 ~ 13500177 (-)
lsm5 lsm5,LOC107653262,LOC107727957,LOC107674592 other downstream 1521444 13307088 ~ 13311525 (-)
G36074 NA other downstream 2121424 12709808 ~ 12711545 (-)
LOC103036331 NA other downstream 2760542 12067533 ~ 12072427 (-)
G36677 NA other upstream 870322 15747400 ~ 15774593 (-)
LOC103023526 ndua4,ndufa4,LOC103023526,LOC108443163,LOC107745684,LOC107684782,LOC107569184 other upstream 960027 15837105 ~ 15840516 (-)
LOC103043629 LOC108412394 other upstream 2036492 16913570 ~ 16915285 (-)
G37183 NA other upstream 2139050 17016128 ~ 17018918 (-)
crym rac1,RAC1,rac1a,crym,LOC105898786,LOC108412270,LOC108437155,LOC107569188 other upstream 2170529 17047607 ~ 17062947 (-)

Expression


Co-expression Network