G36783


Basic Information

Item Value
gene id G36783
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 16211045 ~ 16211697 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU49574
CCCAAGAATGCTATAGAAAAAGGCAGTCTATCCTCATCACTTTCTGAAGATGTGGAGTTAAAGAAGACCAGAACCAGGAGAAGGCAGAGGTGGTGGCGGTGGTGACTACAAAATACTGAGTTGCAGTTTTGAGgactacctttttttttttttttttccctccccctTCCTTCCCTGAACTGAAGTTTAAcacatgctttttttaagtgtataaaGGAAATGTAATCTGTTACTGTACTTAatgatttagtttttgtttaaagTTGTGTGTATGCTTAAGTACATTTTAAGGCAAACAGTTGAAGTAATTTGCTGAACTTTGGGTTTACTTTGAGTGTct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU49574 True 340 lncRNA 0.37 2 16211045 16211697

Neighbor

gene id symbol gene type direction distance location
rhobtb1 rhobtb1,LOC107654062,LOC107727061,LOC107695540,LOC107745661 coding upstream 35850 16149838 ~ 16175195 (+)
LOC103023844 LOC108443155,LOC106596407,LOC107689097 coding upstream 399192 15808205 ~ 15811853 (+)
LOC103033971 NA coding upstream 538601 15621311 ~ 15672444 (+)
LOC103028270 mpp2,LOC108410806,LOC108273574 coding upstream 690451 15441567 ~ 15520594 (+)
LOC103029312 NA coding upstream 787950 15407485 ~ 15423095 (+)
arid5b arid5b,LOC107727057 coding downstream 46463 16258160 ~ 16397388 (+)
nrbf2 nrbf2,LOC108437426,LOC107654066,LOC107593503 coding downstream 196267 16407964 ~ 16527247 (+)
LOC103046195 NA coding downstream 245718 16457415 ~ 16459913 (+)
LOC103044975 reep3,LOC108412837 coding downstream 504194 16715891 ~ 16752203 (+)
tubgcp2 tubgcp2,gcp2 coding downstream 717814 16929511 ~ 16943394 (+)
G36722 NA non-coding upstream 285198 15924785 ~ 15925847 (+)
G36721 NA non-coding upstream 286331 15922772 ~ 15924714 (+)
G36705 NA non-coding upstream 312880 15897181 ~ 15898165 (+)
G36707 NA non-coding upstream 325172 15882457 ~ 15885873 (+)
G36708 NA non-coding upstream 331738 15872548 ~ 15879307 (+)
LOC111192379 NA non-coding downstream 317453 16529150 ~ 16540014 (+)
G36852 NA non-coding downstream 329287 16540984 ~ 16569392 (+)
G36899 cyp26a1,LOC103044660,LOC108412396,LOC108273895,LOC107739064,LOC107596578,LOC107695519,LOC107653962,LOC107593523,LOC107745679 non-coding downstream 521915 16733612 ~ 16792600 (+)
G36915 NA non-coding downstream 624829 16836526 ~ 16837964 (+)
LOC103038048 NA non-coding downstream 651373 16863070 ~ 16866954 (+)
LOC103028998 pyyb,LOC103028998,LOC108410797,LOC107745683,LOC107569181,LOC107684781,LOC107695522,LOC107753323,LOC107560546 other upstream 770888 15432829 ~ 15440157 (+)
G36439 LOC103041415 other upstream 1420212 14789380 ~ 14790833 (+)
LOC107197918 NA other upstream 1643133 14564925 ~ 14567912 (+)
G36371 NA other upstream 1747406 14463137 ~ 14463639 (+)
LOC103039668 LOC108435045 other upstream 2690343 13502246 ~ 13520702 (+)
cabcoco1 NA other downstream 2093 16213790 ~ 16233839 (+)
sun1 NA other downstream 788685 17000382 ~ 17040957 (+)
phf5a phf5a,PHF5A,LOC107584099,LOC102780084,LOC106609350 other downstream 989800 17201497 ~ 17205033 (+)
cby1 cby1 other downstream 1021123 17232820 ~ 17234559 (+)
LOC103027613 cdc42ep1,LOC106609444,LOC105025094,LOC106589540,LOC107734237,LOC107584101,LOC107690062 other downstream 1039284 17250981 ~ 17282231 (+)

Expression


Co-expression Network