G37055


Basic Information

Item Value
gene id G37055
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 17467957 ~ 17468321 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU49957
taacaacgctgcgctgatctccagctactgctcgccgctggtggagtttgctgtagtcagagccaggccattctacctgcccagagagcttagcagcgtgtacataatagcagtgtatgtagcacccagtgctaatgctaacggtgctaatgctaacgctctgcaagaactgtacactgttatctccaaactccagaactcacaccccgacggactgtttattgttgctggtgatttcaatcacagtaatctgaaggctctgctgcccagctttcaccaacatgtggattttccaacccgtggagctaacctgctcgattgtgtgtatactaacattcccggttcgtacagagcagagccccgcc

Function

GO: NA

KEGG:

id description
ko00310 Lysine degradation

RNA

RNA id representative length rna type GC content exon number start site end site
TU49957 True 365 lncRNA 0.51 1 17467957 17468321

Neighbor

gene id symbol gene type direction distance location
LOC111188179 NA coding upstream 43763 17423685 ~ 17424194 (+)
LOC103022777 gspt1,LOC107692072,LOC107690055,LOC107734224,LOC107554042 coding upstream 58023 17397153 ~ 17409934 (+)
dmc1 dmc1 coding upstream 71900 17391730 ~ 17396057 (+)
tomm22 tomm22,LOC107554024,LOC107584213,LOC107692102 coding upstream 77532 17385894 ~ 17390425 (+)
tmem184b tmem184ba,tmem184b,LOC107690057,LOC107584104,LOC107692069,LOC107731404,LOC107554044 coding upstream 93835 17358723 ~ 17374122 (+)
tmem101 tmem101,LOC107708986,LOC107693682 coding downstream 15598 17483919 ~ 17491064 (+)
g6pc3 NA coding downstream 53176 17521497 ~ 17534277 (+)
pagr1 pagr1,LOC107708911 coding downstream 328513 17796834 ~ 17802617 (+)
cabp5 cabp5a,LOC108425940,LOC107708978,LOC107562016,LOC107693687,LOC105909107 coding downstream 410274 17878595 ~ 17888249 (+)
nif3l1 nif3l1 coding downstream 428469 17896790 ~ 17903709 (+)
G37001 NA non-coding upstream 243550 17224041 ~ 17224407 (+)
G37000 NA non-coding upstream 244257 17223335 ~ 17223700 (+)
G36998 NA non-coding upstream 245082 17222400 ~ 17222875 (+)
G36983 NA non-coding upstream 295332 17172425 ~ 17172625 (+)
G36982 NA non-coding upstream 298101 17169351 ~ 17169856 (+)
G37056 NA non-coding downstream 159 17468480 ~ 17468772 (+)
G37058 NA non-coding downstream 2003 17470324 ~ 17470774 (+)
G37060 NA non-coding downstream 7097 17475418 ~ 17475771 (+)
G37066 NA non-coding downstream 41096 17509417 ~ 17509619 (+)
G37068 lsm12 non-coding downstream 41646 17509967 ~ 17517589 (+)
tnrc6b tnrc6b other upstream 127065 17297479 ~ 17340892 (+)
LOC103027613 cdc42ep1,LOC106609444,LOC105025094,LOC106589540,LOC107734237,LOC107584101,LOC107690062 other upstream 185726 17250981 ~ 17282231 (+)
cby1 cby1 other upstream 233398 17232820 ~ 17234559 (+)
phf5a phf5a,PHF5A,LOC107584099,LOC102780084,LOC106609350 other upstream 262924 17201497 ~ 17205033 (+)
sun1 NA other upstream 427000 17000382 ~ 17040957 (+)
LOC103045739 LOC103045739 other downstream 237358 17705679 ~ 17708597 (+)
G37098 NA other downstream 246808 17715129 ~ 17715992 (+)
G37099 NA other downstream 249910 17718231 ~ 17719376 (+)
G37131 taok2,LOC108425925,LOC108273910 other downstream 389596 17857917 ~ 17863066 (+)
G37152 LOC108425993 other downstream 484259 17952580 ~ 17960304 (+)

Expression


Co-expression Network