G37098


Basic Information

Item Value
gene id G37098
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 17715129 ~ 17715992 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU50007
CTTCTCACTTCTctctcagctcctgcagctcgtCCCACATCTCCTCGTCTTCGCTCTCTGACTCATCGCTGCTCATGTAGGAGGAGGTGCGGGTGTAGCTCATCCACAGGTTGTTGAGAGGGGTGGGATACGGAGGGCTGCCCATCATCCCGTCCCACAGACTCCCCTCCGGATCCAGAGCGATGGAAAGCCCGCTGTCCACCGACGTCCCCATCACAGACTGATCACAGTCAAGCTTACGGGccctcttcttctgctgctgctgctgatggtgctgctgctgctgctgatggtggtggtgaaggTCGTACGGCTCCTCTTCACCACTACGCTGCACCTCCTGTTTCTCCTCAGCTTCCACCGCTGTCGTGCTCTCAGGCGGAGTGGAAGGATATTCCTGGAGGGAGGAAACTTCATGAGGAGGAACGGGCGGTAAGATCCCTAAGGAGTTATTTAGCTCAGTAGCTACAGCTGAGGATCTAGACGGGTCTTGAGGAACATCTGTATGGAGGTGTTGAGAGAAATCAGAGTTTATGCAGGTGACTTCACTCCCCGCTGAGGCTCTTCTTCCCTCTATCTGTGGAGAGTTCTCATGGGAAGTGCAAACAGAAGAGCTGGGCACTTGTGTGGATGGAGTGTCGGGTGAGGCGGGAGGTGTAGGTGTGGATCCAGGTGGAGTTTTACTGATGTCCACTGGTGTTGGGAACTCCTTCGAGGGGGAAACCTGGAAGCGTCCGACTGTAACTGTGGACTTTGGTTCTGCAGGAGAAACACAAAGTTACAGTTCATTAATACAGTGAAGATCTGATCTGAAGAACCAATTCAGTTTTTGCACTGGTACAGTAATTTTTACTACAAAATTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50007 True 864 TUCP 0.53 1 17715129 17715992

Neighbor

gene id symbol gene type direction distance location
g6pc3 NA coding upstream 180852 17521497 ~ 17534277 (+)
tmem101 tmem101,LOC107708986,LOC107693682 coding upstream 224065 17483919 ~ 17491064 (+)
LOC111188179 NA coding upstream 290935 17423685 ~ 17424194 (+)
LOC103022777 gspt1,LOC107692072,LOC107690055,LOC107734224,LOC107554042 coding upstream 305195 17397153 ~ 17409934 (+)
dmc1 dmc1 coding upstream 319072 17391730 ~ 17396057 (+)
pagr1 pagr1,LOC107708911 coding downstream 80842 17796834 ~ 17802617 (+)
cabp5 cabp5a,LOC108425940,LOC107708978,LOC107562016,LOC107693687,LOC105909107 coding downstream 162603 17878595 ~ 17888249 (+)
nif3l1 nif3l1 coding downstream 180798 17896790 ~ 17903709 (+)
LOC103030008 NA coding downstream 200872 17916864 ~ 17924970 (+)
LOC103029386 NA coding downstream 313106 18029098 ~ 18039806 (+)
G37097 NA non-coding upstream 1038 17713885 ~ 17714091 (+)
G37096 NA non-coding upstream 1442 17713461 ~ 17713687 (+)
G37092 NA non-coding upstream 5293 17684712 ~ 17709836 (+)
G37089 NA non-coding upstream 16477 17693790 ~ 17698652 (+)
G37068 lsm12 non-coding upstream 197540 17509967 ~ 17517589 (+)
G37108 vps25 non-coding downstream 76034 17792026 ~ 17793801 (+)
G37120 maz non-coding downstream 106419 17822411 ~ 17828668 (+)
G37137 NA non-coding downstream 176670 17892662 ~ 17892962 (+)
G37141 NA non-coding downstream 196830 17912822 ~ 17913085 (+)
G37151 eif3c non-coding downstream 225856 17941848 ~ 17949188 (+)
LOC103045739 LOC103045739 other upstream 6532 17705679 ~ 17708597 (+)
tnrc6b tnrc6b other upstream 374237 17297479 ~ 17340892 (+)
LOC103027613 cdc42ep1,LOC106609444,LOC105025094,LOC106589540,LOC107734237,LOC107584101,LOC107690062 other upstream 432898 17250981 ~ 17282231 (+)
cby1 cby1 other upstream 480570 17232820 ~ 17234559 (+)
phf5a phf5a,PHF5A,LOC107584099,LOC102780084,LOC106609350 other upstream 510096 17201497 ~ 17205033 (+)
G37099 NA other downstream 2239 17718231 ~ 17719376 (+)
G37131 taok2,LOC108425925,LOC108273910 other downstream 141925 17857917 ~ 17863066 (+)
G37152 LOC108425993 other downstream 236588 17952580 ~ 17960304 (+)
G37155 ppp4c,ppp4cb,LOC105024361,LOC107590569,LOC107690278 other downstream 245948 17961940 ~ 17970999 (+)
LOC103046566 NA other downstream 347991 18063983 ~ 18099979 (+)

Expression


Co-expression Network