G37099


Basic Information

Item Value
gene id G37099
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 17718231 ~ 17719376 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU50008
CTGTGCTCTCTGGACTCGCTCTGGGTGAAGACAATGACCCAGATGATGACGAGGAGGAGGATGACGAGGAGGATCTATAGAGGCCTGACTGGTCCAGTGAAGATATTGGGAACGTCTGTGTGTACCCTTGAGGGCCGGGGAACTCTTTTGGGAGATGATCGATGTGTCCAGGCGGTCTGCCCTCTCCCATCTCCTGTAGGATGTTGGCGTACATCTGCAGAAGGTGCGTGGGCATCATTGGTGCTTGATTGTGCATGCTGGAATGTGTCTTCTGTGTATAACCATACATGGCCTCCCAGTTCGGAGCTTCCGGGTGACCCCCAGGACCAACCTGCTGGTAGAAGCCCTCGGCCTGCATGGGCGGAGCATACTGCGGCGCGTATACTGATGGATACCCAGGCTGTGGTTGGATGTGGTGGGCAAACTGAGGAGGAAAGCCGGGTATAGAGGGAAGAGGCTGCATCAGGGGGGACGGTAGACTCTGGGCAGGGATGAAAGAGTGCGCCATGCTCATGGCCATGGACAGCATATTGGCTAGAGAGAAAAGGGGAGGGGTTTGCGGCGGCCACATGTTGGCCGTGTGGTTTTGAAGGACGGGAGAGGTTAAGGGGCTGTTGAGGTCACTGGTTGGGCTCAGGAGGTCTAGAGCGAGGGGGCCCGGTGAAGAGCATGAAGAAGGTGGTGACGACAAGGAGTAGGTGGGGTTACTGTGGACCCCGGGAGAGTGAGGGATGGCTGGGTTGGGGGGAGCCGGGATGGGGCGGGTACTGGAAGGGCATGTGGGTGGAGGTGGCCACGTAGGGCATTGGATACTGCTGCAGGTGGGCAAGCTTAGAGAGGGACGCCATGGGGTCCGACTGGTAGGGCGGAGCCGGGTGGCCCTGAAATGGACGGGAGGTTcctggaagagagagagagaaaaaagaagaaaaattgttgttaattacaataataataataatgacgtTTTTACTGTGACCTCAAGAAACAGCAAATTAGCTCTGTGTTGATTGGCTGCATTTTATTATGactaaattaaaaagaagtCTAAAAAGGCTAAAACACTCTTATAACTAAGCTAAAAAGCAGCTATATGTAAATCGTTTGGTTGTAAAGAACccacataaacatttaaatgattaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50008 True 1146 TUCP 0.52 1 17718231 17719376

Neighbor

gene id symbol gene type direction distance location
g6pc3 NA coding upstream 183954 17521497 ~ 17534277 (+)
tmem101 tmem101,LOC107708986,LOC107693682 coding upstream 227167 17483919 ~ 17491064 (+)
LOC111188179 NA coding upstream 294037 17423685 ~ 17424194 (+)
LOC103022777 gspt1,LOC107692072,LOC107690055,LOC107734224,LOC107554042 coding upstream 308297 17397153 ~ 17409934 (+)
dmc1 dmc1 coding upstream 322174 17391730 ~ 17396057 (+)
pagr1 pagr1,LOC107708911 coding downstream 77458 17796834 ~ 17802617 (+)
cabp5 cabp5a,LOC108425940,LOC107708978,LOC107562016,LOC107693687,LOC105909107 coding downstream 159219 17878595 ~ 17888249 (+)
nif3l1 nif3l1 coding downstream 177414 17896790 ~ 17903709 (+)
LOC103030008 NA coding downstream 197488 17916864 ~ 17924970 (+)
LOC103029386 NA coding downstream 309722 18029098 ~ 18039806 (+)
G37097 NA non-coding upstream 4140 17713885 ~ 17714091 (+)
G37096 NA non-coding upstream 4544 17713461 ~ 17713687 (+)
G37092 NA non-coding upstream 8395 17684712 ~ 17709836 (+)
G37089 NA non-coding upstream 19579 17693790 ~ 17698652 (+)
G37068 lsm12 non-coding upstream 200642 17509967 ~ 17517589 (+)
G37108 vps25 non-coding downstream 72650 17792026 ~ 17793801 (+)
G37120 maz non-coding downstream 103035 17822411 ~ 17828668 (+)
G37137 NA non-coding downstream 173286 17892662 ~ 17892962 (+)
G37141 NA non-coding downstream 193446 17912822 ~ 17913085 (+)
G37151 eif3c non-coding downstream 222472 17941848 ~ 17949188 (+)
G37098 NA other upstream 2239 17715129 ~ 17715992 (+)
LOC103045739 LOC103045739 other upstream 9634 17705679 ~ 17708597 (+)
tnrc6b tnrc6b other upstream 377339 17297479 ~ 17340892 (+)
LOC103027613 cdc42ep1,LOC106609444,LOC105025094,LOC106589540,LOC107734237,LOC107584101,LOC107690062 other upstream 436000 17250981 ~ 17282231 (+)
cby1 cby1 other upstream 483672 17232820 ~ 17234559 (+)
G37131 taok2,LOC108425925,LOC108273910 other downstream 138541 17857917 ~ 17863066 (+)
G37152 LOC108425993 other downstream 233204 17952580 ~ 17960304 (+)
G37155 ppp4c,ppp4cb,LOC105024361,LOC107590569,LOC107690278 other downstream 242564 17961940 ~ 17970999 (+)
LOC103046566 NA other downstream 344607 18063983 ~ 18099979 (+)
G37404 NA other downstream 388188 18107564 ~ 18113926 (+)

Expression


Co-expression Network